Detailed information NTG0409373

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GPY14_RS15565
• Genome accession: NZ_CP046918
• Coordinates: 3264028..3265176 (+)
• Length: 382 a.a.
• NCBI ID: WP_033575082.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain BA-26
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3259028..3270176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY14_RS15545 (GPY14_15545)	-	3259426..3260109 (-)	684	WP_033575085.1	ABC transporter ATP-binding protein	-
GPY14_RS15550 (GPY14_15550)	-	3260124..3261560 (-)	1437	WP_033575084.1	ABC transporter permease	-
GPY14_RS15555 (GPY14_15555)	-	3261772..3262455 (+)	684	WP_007410267.1	response regulator transcription factor	-
GPY14_RS15560 (GPY14_15560)	-	3262442..3263875 (+)	1434	WP_015416810.1	sensor histidine kinase	-
GPY14_RS15565 (GPY14_15565)	rapC	3264028..3265176 (+)	1149	WP_033575082.1	Rap family tetratricopeptide repeat protein	Regulator
GPY14_RS15570 (GPY14_15570)	phrC	3265160..3265279 (+)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
GPY14_RS15575 (GPY14_15575)	-	3265426..3265536 (-)	111	WP_370529518.1	YjcZ family sporulation protein	-
GPY14_RS15580 (GPY14_15580)	-	3265616..3266980 (-)	1365	WP_033575080.1	aspartate kinase	-
GPY14_RS15585 (GPY14_15585)	ceuB	3267394..3268347 (+)	954	WP_158186003.1	ABC transporter permease	Machinery gene
GPY14_RS15590 (GPY14_15590)	-	3268337..3269284 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
GPY14_RS15595 (GPY14_15595)	-	3269278..3270036 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45491.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=409373 GPY14_RS15565 WP_033575082.1 3264028..3265176(+) (rapC) [Bacillus velezensis strain BA-26]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISSCFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=409373 GPY14_RS15565 WP_033575082.1 3264028..3265176(+) (rapC) [Bacillus velezensis strain BA-26]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACTTTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCTCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568