Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   GPY14_RS15365 Genome accession   NZ_CP046918
Coordinates   3202831..3203229 (-) Length   132 a.a.
NCBI ID   WP_015416782.1    Uniprot ID   -
Organism   Bacillus velezensis strain BA-26     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3197831..3208229
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPY14_RS15340 (GPY14_15340) - 3198003..3199205 (+) 1203 WP_015416778.1 GTP-binding protein -
  GPY14_RS15345 (GPY14_15345) - 3199270..3200406 (+) 1137 WP_015416779.1 zinc-dependent alcohol dehydrogenase -
  GPY14_RS15350 (GPY14_15350) - 3200421..3200855 (+) 435 WP_033575151.1 RDD family protein -
  GPY14_RS15355 (GPY14_15355) - 3200972..3201250 (+) 279 WP_263612330.1 YckD family protein -
  GPY14_RS15360 (GPY14_15360) - 3201354..3202790 (+) 1437 WP_015416781.1 glycoside hydrolase family 1 protein -
  GPY14_RS15365 (GPY14_15365) nin/comJ 3202831..3203229 (-) 399 WP_015416782.1 competence protein ComJ Regulator
  GPY14_RS15370 (GPY14_15370) nucA/comI 3203250..3203687 (-) 438 WP_015416783.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  GPY14_RS15375 (GPY14_15375) hxlB 3204045..3204602 (-) 558 WP_015416784.1 6-phospho-3-hexuloisomerase -
  GPY14_RS15380 (GPY14_15380) hxlA 3204599..3205234 (-) 636 WP_015416785.1 3-hexulose-6-phosphate synthase -
  GPY14_RS15385 (GPY14_15385) - 3205466..3205828 (+) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15024.00 Da        Isoelectric Point: 4.9712

>NTDB_id=409371 GPY14_RS15365 WP_015416782.1 3202831..3203229(-) (nin/comJ) [Bacillus velezensis strain BA-26]
MNKSWKPQELTISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAASM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=409371 GPY14_RS15365 WP_015416782.1 3202831..3203229(-) (nin/comJ) [Bacillus velezensis strain BA-26]
TTGAATAAATCATGGAAACCGCAAGAACTGACCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCTCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment