Detailed information NTG0409304

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FAZ98_RS01360
• Genome accession: NZ_CP046913
• Coordinates: 311338..312516 (-)
• Length: 392 a.a.
• NCBI ID: WP_158948058.1
• Uniprot ID: A0A7Z2JEH8
• Organism: Paraburkholderia acidisoli strain DHF22
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 306338..317516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FAZ98_RS01340 (FAZ98_01340)	-	307951..308169 (-)	219	WP_158948050.1	hypothetical protein	-
FAZ98_RS01345 (FAZ98_01345)	ybiB	308520..309482 (-)	963	WP_158948052.1	DNA-binding protein YbiB	-
FAZ98_RS01350 (FAZ98_01350)	-	309805..310503 (+)	699	WP_158948054.1	fumarylacetoacetate hydrolase family protein	-
FAZ98_RS01355 (FAZ98_01355)	maiA	310597..311244 (+)	648	WP_158948056.1	maleylacetoacetate isomerase	-
FAZ98_RS01360 (FAZ98_01360)	pilA	311338..312516 (-)	1179	WP_158948058.1	signal recognition particle-docking protein FtsY	Machinery gene
FAZ98_RS01365 (FAZ98_01365)	rsmD	312867..313508 (+)	642	WP_158948060.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FAZ98_RS01370 (FAZ98_01370)	coaD	313613..314104 (+)	492	WP_158948062.1	pantetheine-phosphate adenylyltransferase	-
FAZ98_RS01375 (FAZ98_01375)	-	314189..315376 (-)	1188	WP_158948064.1	hypothetical protein	-
FAZ98_RS01380 (FAZ98_01380)	-	315545..316315 (-)	771	WP_158948066.1	FkbM family methyltransferase	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 41847.10 Da
• Isoelectric Point: 4.8259

>NTDB_id=409304 FAZ98_RS01360 WP_158948058.1 311338..312516(-) (pilA) [Paraburkholderia acidisoli strain DHF22]
MFSFFKRFRGKDDAENAQAEAPEAQDALDEHTAGEIDAPADIAEPVAPVAPITPVVPVTPAAKPVAPAPQVPARIDEPEA
VEIVPPPPLEAAAKRSWLTRLKSGLSKTSSNIQSIFVNAKIDDDLYEELETALLMSDAGVDATEYLLETLRQKVRADRLT
EAQQVKVALRGLLIDLLKPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFNQSVLLAAGDTFRAAAREQLAI
WGERNNVTVVQQESGDPAAVIFDAVSAARARRIDVVMADTAGRLPTQLHLMDELKKVKRVIGKAYEGAPHEVLLVIDANT
GQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFVAEEFADALLGG

Nucleotide

• Length: 1179 bp

>NTDB_id=409304 FAZ98_RS01360 WP_158948058.1 311338..312516(-) (pilA) [Paraburkholderia acidisoli strain DHF22]
ATGTTCAGTTTCTTCAAACGATTCCGCGGCAAGGACGACGCCGAGAACGCGCAGGCCGAAGCGCCCGAGGCGCAGGACGC
CCTCGACGAACACACCGCCGGCGAGATCGACGCGCCCGCTGACATCGCCGAGCCGGTCGCGCCGGTCGCGCCGATCACGC
CGGTCGTGCCGGTAACGCCCGCCGCCAAACCCGTCGCCCCCGCGCCGCAGGTCCCCGCTCGCATCGACGAACCCGAAGCC
GTCGAGATCGTGCCGCCGCCGCCGCTGGAGGCCGCCGCGAAGCGCTCGTGGCTCACGCGCCTGAAGAGCGGGCTCTCCAA
GACGAGTTCGAACATCCAGAGCATCTTCGTCAACGCGAAGATCGACGACGACCTCTACGAGGAACTGGAAACGGCGTTGC
TGATGTCCGACGCGGGCGTGGACGCCACCGAATATCTGCTCGAAACGCTGCGTCAGAAGGTGCGCGCCGACCGTCTCACC
GAAGCGCAGCAGGTGAAGGTCGCGCTGCGCGGCCTGCTGATCGACCTGCTCAAGCCGCTCGAAAAGTCGCTGATGCTCGG
CCGCGCCCAACCGCTCGTGATGATGATCGCGGGCGTGAACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTCGCCAAGC
ATCTGCAGAGCTTCAACCAGAGCGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCCGCCGCGCGCGAGCAACTGGCAATC
TGGGGCGAGCGCAACAACGTCACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATCTTCGACGCGGTGAGCGC
CGCGCGCGCGCGCCGTATCGACGTGGTGATGGCCGATACCGCCGGCCGTCTGCCCACGCAGCTGCACCTCATGGACGAGC
TGAAGAAGGTCAAGCGCGTGATCGGCAAGGCCTACGAAGGCGCGCCGCACGAAGTGCTGCTCGTGATCGACGCCAACACG
GGGCAGAACGCCCTCGCGCAGGTGAAAGCCTTCGACGACGCGCTCGGCCTCACCGGTCTCATCGTCACCAAGCTCGACGG
CACGGCGAAGGGCGGCATTCTCGCGGCCATCGCGCGCCAGCGCCCGATTCCGGTGTACTTCATCGGCGTGGGCGAAAAGG
TCGAAGACTTGCAGCCGTTCGTGGCCGAGGAATTCGCGGACGCTCTGCTCGGCGGTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (110-170)

• SRP54-type protein, GTPase domain (SRP54) (192-391)

3D structure

• AlphaFold DB: A0A7Z2JEH8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.943	100	0.551