Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | FAZ97_RS01445 | Genome accession | NZ_CP046909 |
| Coordinates | 310228..311397 (-) | Length | 389 a.a. |
| NCBI ID | WP_158756853.1 | Uniprot ID | A0A7Z2J720 |
| Organism | Paraburkholderia acidiphila strain 7Q-K02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 305228..316397
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FAZ97_RS01420 (FAZ97_01420) | leuA | 305269..306915 (-) | 1647 | WP_158756848.1 | 2-isopropylmalate synthase | - |
| FAZ97_RS01425 (FAZ97_01425) | - | 306905..307108 (-) | 204 | WP_158756849.1 | hypothetical protein | - |
| FAZ97_RS01430 (FAZ97_01430) | ybiB | 307501..308463 (-) | 963 | WP_158756850.1 | DNA-binding protein YbiB | - |
| FAZ97_RS01435 (FAZ97_01435) | - | 308740..309438 (+) | 699 | WP_158756851.1 | fumarylacetoacetate hydrolase family protein | - |
| FAZ97_RS01440 (FAZ97_01440) | maiA | 309483..310130 (+) | 648 | WP_158756852.1 | maleylacetoacetate isomerase | - |
| FAZ97_RS01445 (FAZ97_01445) | pilA | 310228..311397 (-) | 1170 | WP_158756853.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| FAZ97_RS01450 (FAZ97_01450) | rsmD | 311688..312326 (+) | 639 | WP_158756854.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FAZ97_RS01455 (FAZ97_01455) | coaD | 312435..312938 (+) | 504 | WP_158756855.1 | pantetheine-phosphate adenylyltransferase | - |
| FAZ97_RS01460 (FAZ97_01460) | - | 313019..313279 (+) | 261 | WP_158756856.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| FAZ97_RS01465 (FAZ97_01465) | hisC | 313349..314416 (-) | 1068 | WP_158756857.1 | histidinol-phosphate transaminase | - |
| FAZ97_RS01470 (FAZ97_01470) | pth | 314432..315034 (-) | 603 | WP_158756858.1 | aminoacyl-tRNA hydrolase | - |
| FAZ97_RS01475 (FAZ97_01475) | - | 315184..315792 (-) | 609 | WP_158756859.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
Sequence
Protein
Download Length: 389 a.a. Molecular weight: 41444.26 Da Isoelectric Point: 4.7517
>NTDB_id=409291 FAZ97_RS01445 WP_158756853.1 310228..311397(-) (pilA) [Paraburkholderia acidiphila strain 7Q-K02]
MFSFFKRFRGSKDAEHAPSENAQDEATLEAPDEAVEAPASTASETSPAPSVPPAVTAPSKPAAPPQVTIASDDEPETVEI
VPPPALEPAAKQSWLTRLRSGLSKTGSNIQSIFVNAKIDDDLYEELETALLMSDAGVDATEYLLETLRQKVRAERLTDAQ
QVKNALRELLVGLLKPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGQ
RNNVTVVQQESGDPAAVIYDAVSAARARRIDVVMADTAGRLPTQLHLMDELKKVKRVIGKAFDGAPHEVVLVIDANTGQN
ALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFVAEEFADALLGS
MFSFFKRFRGSKDAEHAPSENAQDEATLEAPDEAVEAPASTASETSPAPSVPPAVTAPSKPAAPPQVTIASDDEPETVEI
VPPPALEPAAKQSWLTRLRSGLSKTGSNIQSIFVNAKIDDDLYEELETALLMSDAGVDATEYLLETLRQKVRAERLTDAQ
QVKNALRELLVGLLKPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAIWGQ
RNNVTVVQQESGDPAAVIYDAVSAARARRIDVVMADTAGRLPTQLHLMDELKKVKRVIGKAFDGAPHEVVLVIDANTGQN
ALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFVAEEFADALLGS
Nucleotide
Download Length: 1170 bp
>NTDB_id=409291 FAZ97_RS01445 WP_158756853.1 310228..311397(-) (pilA) [Paraburkholderia acidiphila strain 7Q-K02]
ATGTTCAGTTTCTTCAAACGATTCCGCGGCTCGAAGGACGCCGAGCACGCGCCGTCCGAGAATGCTCAGGACGAAGCCAC
GCTCGAGGCGCCAGACGAGGCCGTTGAAGCACCCGCCAGCACGGCGAGCGAAACCTCGCCTGCGCCGTCCGTACCGCCAG
CCGTAACCGCTCCGAGCAAGCCCGCTGCGCCGCCGCAGGTCACCATCGCCAGCGACGACGAACCGGAAACCGTCGAGATC
GTCCCGCCGCCCGCGCTCGAACCCGCCGCAAAGCAATCGTGGCTCACGCGTCTGCGGTCCGGGCTCTCGAAAACAGGCTC
AAACATCCAGAGCATCTTCGTCAACGCGAAGATCGACGACGATCTGTATGAGGAGCTCGAAACCGCGCTCCTGATGTCGG
ATGCGGGCGTCGACGCCACCGAATACCTGCTCGAAACGCTGCGCCAGAAAGTGCGCGCCGAGCGCCTGACCGACGCGCAG
CAGGTGAAGAACGCCCTGCGCGAACTGCTCGTCGGCCTGCTCAAGCCACTCGAAAAGTCGCTCATGCTCGGTCGCGCCCA
GCCGCTCGTGATGATGATCGCGGGCGTGAACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTGGCGAAGCATCTGCAGA
GCTTCGACCAGAGCGTGCTGCTCGCTGCGGGCGACACGTTCCGCGCCGCCGCGCGCGAACAGCTCGCCATCTGGGGCCAG
CGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGACCCGGCCGCGGTGATCTACGACGCCGTGAGCGCCGCACGCGC
GCGCCGCATCGACGTGGTGATGGCCGACACCGCGGGCCGCCTGCCCACGCAATTGCATCTGATGGACGAGCTGAAGAAGG
TCAAGCGCGTGATCGGCAAGGCGTTCGACGGTGCCCCGCACGAGGTAGTGCTCGTGATCGATGCGAACACGGGGCAGAAC
GCGCTCGCGCAGGTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTGACGAAGCTCGACGGCACCGCCAA
GGGCGGCATTCTTGCCGCGATCGCTCGGCAACGCCCGATTCCCGTGTATTTCATCGGCGTGGGCGAGAAGGTCGAGGACT
TGCAGCCGTTCGTGGCCGAGGAATTCGCCGACGCGCTGCTTGGCAGCTAA
ATGTTCAGTTTCTTCAAACGATTCCGCGGCTCGAAGGACGCCGAGCACGCGCCGTCCGAGAATGCTCAGGACGAAGCCAC
GCTCGAGGCGCCAGACGAGGCCGTTGAAGCACCCGCCAGCACGGCGAGCGAAACCTCGCCTGCGCCGTCCGTACCGCCAG
CCGTAACCGCTCCGAGCAAGCCCGCTGCGCCGCCGCAGGTCACCATCGCCAGCGACGACGAACCGGAAACCGTCGAGATC
GTCCCGCCGCCCGCGCTCGAACCCGCCGCAAAGCAATCGTGGCTCACGCGTCTGCGGTCCGGGCTCTCGAAAACAGGCTC
AAACATCCAGAGCATCTTCGTCAACGCGAAGATCGACGACGATCTGTATGAGGAGCTCGAAACCGCGCTCCTGATGTCGG
ATGCGGGCGTCGACGCCACCGAATACCTGCTCGAAACGCTGCGCCAGAAAGTGCGCGCCGAGCGCCTGACCGACGCGCAG
CAGGTGAAGAACGCCCTGCGCGAACTGCTCGTCGGCCTGCTCAAGCCACTCGAAAAGTCGCTCATGCTCGGTCGCGCCCA
GCCGCTCGTGATGATGATCGCGGGCGTGAACGGCGCGGGCAAGACCACCAGCATCGGCAAGCTGGCGAAGCATCTGCAGA
GCTTCGACCAGAGCGTGCTGCTCGCTGCGGGCGACACGTTCCGCGCCGCCGCGCGCGAACAGCTCGCCATCTGGGGCCAG
CGCAACAACGTGACGGTCGTGCAGCAGGAAAGCGGCGACCCGGCCGCGGTGATCTACGACGCCGTGAGCGCCGCACGCGC
GCGCCGCATCGACGTGGTGATGGCCGACACCGCGGGCCGCCTGCCCACGCAATTGCATCTGATGGACGAGCTGAAGAAGG
TCAAGCGCGTGATCGGCAAGGCGTTCGACGGTGCCCCGCACGAGGTAGTGCTCGTGATCGATGCGAACACGGGGCAGAAC
GCGCTCGCGCAGGTCAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTCATCGTGACGAAGCTCGACGGCACCGCCAA
GGGCGGCATTCTTGCCGCGATCGCTCGGCAACGCCCGATTCCCGTGTATTTCATCGGCGTGGGCGAGAAGGTCGAGGACT
TGCAGCCGTTCGTGGCCGAGGAATTCGCCGACGCGCTGCTTGGCAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
51.79 |
100 |
0.558 |