Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   GQA94_RS01455 Genome accession   NZ_CP046902
Coordinates   322470..322877 (-) Length   135 a.a.
NCBI ID   WP_019339789.1    Uniprot ID   A0A653VR38
Organism   Stutzerimonas stutzeri strain PM101005     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 317470..327877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQA94_RS01435 (GQA94_01435) - 318432..319298 (-) 867 WP_158186388.1 CheR family methyltransferase -
  GQA94_RS01440 (GQA94_01440) - 319357..321405 (-) 2049 WP_158186389.1 methyl-accepting chemotaxis protein -
  GQA94_RS01445 (GQA94_01445) - 321485..322021 (-) 537 WP_158186390.1 chemotaxis protein CheW -
  GQA94_RS01450 (GQA94_01450) pilH 322060..322425 (-) 366 WP_158186391.1 twitching motility response regulator PilH -
  GQA94_RS01455 (GQA94_01455) pilG 322470..322877 (-) 408 WP_019339789.1 twitching motility response regulator PilG Regulator
  GQA94_RS01460 (GQA94_01460) gshB 323114..324076 (+) 963 WP_158186392.1 glutathione synthase -
  GQA94_RS01465 (GQA94_01465) - 324252..325148 (+) 897 WP_158186393.1 energy transducer TonB -
  GQA94_RS01470 (GQA94_01470) - 325229..325798 (+) 570 WP_158186394.1 YqgE/AlgH family protein -
  GQA94_RS01475 (GQA94_01475) ruvX 325795..326223 (+) 429 WP_158186395.1 Holliday junction resolvase RuvX -
  GQA94_RS01480 (GQA94_01480) pyrR 326243..326755 (+) 513 WP_158186396.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  GQA94_RS01485 (GQA94_01485) - 326766..327782 (+) 1017 WP_158186397.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14840.24 Da        Isoelectric Point: 7.2439

>NTDB_id=409212 GQA94_RS01455 WP_019339789.1 322470..322877(-) (pilG) [Stutzerimonas stutzeri strain PM101005]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADSHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=409212 GQA94_RS01455 WP_019339789.1 322470..322877(-) (pilG) [Stutzerimonas stutzeri strain PM101005]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCTGAAACGCTGCT
GAAGAAAGTGGGATGTGATGTGATTACAGCGGTGGATGGCTTCGATGCGCTCGCCAAGATTGCCGATAGCCACCCGCGCA
TTATCTTCGTCGATATCATGATGCCCCGGCTGGATGGCTATCAGACCTGCGCGCTGATCAAGAACAACAGTTCTTTCAAG
TCCACCCCGGTGATCATGCTGTCATCCAAGGATGGCCTGTTCGACAAGGCCAAGGGGCGGATCGTGGGGTCGGACCAATA
CCTCACCAAGCCTTTCAGCAAAGAAGAGTTGCTGGGTGCCATCAAGGCGCACGTGCCTGATTTCGCACCCGTAGAGCAAG
TATCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A653VR38

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment