Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   GP482_RS08055 Genome accession   NZ_CP046875
Coordinates   1654870..1655652 (+) Length   260 a.a.
NCBI ID   WP_158914653.1    Uniprot ID   A0A6G8HZL4
Organism   Streptococcus ruminicola strain CNU_77-61     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1649870..1660652
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GP482_RS08045 (GP482_08045) rlmH 1652852..1653331 (-) 480 WP_039696083.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GP482_RS08050 (GP482_08050) htrA 1653547..1654803 (+) 1257 WP_158914651.1 trypsin-like peptidase domain-containing protein Regulator
  GP482_RS08055 (GP482_08055) spo0J 1654870..1655652 (+) 783 WP_158914653.1 ParB/RepB/Spo0J family partition protein Regulator
  GP482_RS08060 (GP482_08060) dnaA 1655856..1657211 (+) 1356 WP_039696081.1 chromosomal replication initiator protein DnaA -
  GP482_RS08065 (GP482_08065) dnaN 1657370..1658506 (+) 1137 WP_158914655.1 DNA polymerase III subunit beta -
  GP482_RS08070 (GP482_08070) - 1658637..1659521 (+) 885 WP_158914657.1 diacylglycerol kinase family protein -
  GP482_RS08075 (GP482_08075) - 1659532..1659723 (+) 192 WP_039696077.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 260 a.a.        Molecular weight: 29807.65 Da        Isoelectric Point: 9.6238

>NTDB_id=409141 GP482_RS08055 WP_158914653.1 1654870..1655652(+) (spo0J) [Streptococcus ruminicola strain CNU_77-61]
MIETLNLIPIDDIAPNPYQPRLKFKPEELEELSRSIKANGLIQPIIVRKSDIFGYELIAGERRLKASKMAGLSEIPAIIK
DITNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDKNQMTHEELAQFMGKSRPYITNCLRLLNLPTIISHAVEKGELSQG
HARVLLTLKDEKEQEKWYQKILSEDMSVRKLEQAVKSTKKKKTSPKVSKKDIFIRHQEEELSKLLGLPVTLSLSKSGFKG
DLQLHFQSEEDLNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=409141 GP482_RS08055 WP_158914653.1 1654870..1655652(+) (spo0J) [Streptococcus ruminicola strain CNU_77-61]
ATGATTGAAACACTTAATCTCATACCTATTGACGATATTGCACCAAATCCTTATCAACCTCGCTTGAAATTTAAGCCAGA
AGAATTAGAAGAACTTTCTCGCTCAATAAAGGCAAACGGCCTCATACAGCCGATAATCGTCCGTAAATCAGATATTTTTG
GTTACGAGCTCATTGCAGGCGAAAGACGTCTTAAAGCATCAAAAATGGCTGGTTTAAGCGAAATTCCTGCAATTATAAAA
GATATTACTAATAAAGAAAGCATGCAGCTTGCTATTGTTGAAAATTTGCAGCGCTCTGACCTCAATCCTATTGAAGAAGC
CAAGGCTTATCAGCAATTGCTCGATAAAAACCAAATGACTCACGAAGAGTTGGCACAATTTATGGGAAAATCACGACCAT
ATATCACTAATTGCTTGCGCTTATTGAATTTACCGACGATTATTTCTCATGCCGTCGAAAAAGGTGAACTTTCTCAAGGA
CACGCGCGTGTGCTACTGACACTTAAGGACGAAAAAGAGCAGGAGAAGTGGTACCAAAAAATTCTGAGCGAAGATATGAG
CGTTCGCAAACTCGAACAAGCTGTAAAATCTACTAAAAAGAAAAAAACATCTCCTAAAGTAAGCAAAAAAGATATTTTTA
TCCGTCATCAAGAAGAAGAATTATCAAAATTATTAGGTCTCCCCGTCACCTTATCACTTTCTAAAAGTGGCTTTAAAGGA
GACTTACAATTACATTTTCAATCAGAAGAAGACTTAAACAGAATTATCAACAGGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G8HZL4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.004

99.615

0.608


Multiple sequence alignment