Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | GO174_RS10605 | Genome accession | NZ_CP046857 |
| Coordinates | 2251064..2251681 (+) | Length | 205 a.a. |
| NCBI ID | WP_024374317.1 | Uniprot ID | M1KD28 |
| Organism | Vibrio fluvialis strain 2015AW-0233 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2246064..2256681
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO174_RS10580 | panC | 2246522..2247403 (+) | 882 | WP_020331996.1 | pantoate--beta-alanine ligase | - |
| GO174_RS10585 | - | 2247462..2248232 (-) | 771 | WP_020331995.1 | ABC transporter permease | - |
| GO174_RS10590 | - | 2248237..2249154 (-) | 918 | WP_020331993.1 | ABC transporter ATP-binding protein | - |
| GO174_RS10595 | can | 2249498..2250166 (+) | 669 | WP_020331992.1 | carbonate dehydratase | - |
| GO174_RS10600 | hpt | 2250216..2250743 (-) | 528 | WP_020331991.1 | hypoxanthine phosphoribosyltransferase | - |
| GO174_RS10605 | opaR | 2251064..2251681 (+) | 618 | WP_024374317.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| GO174_RS10610 | lpdA | 2251803..2253230 (-) | 1428 | WP_020430460.1 | dihydrolipoyl dehydrogenase | - |
| GO174_RS10615 | aceF | 2253489..2255384 (-) | 1896 | WP_158125399.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23890.30 Da Isoelectric Point: 6.2346
>NTDB_id=408997 GO174_RS10605 WP_024374317.1 2251064..2251681(+) (opaR) [Vibrio fluvialis strain 2015AW-0233]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDIHAKENLTNITDEMVKLANEDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLVKNMFSKAIERGEVCEQHDP
EDLATLFHGVCYSLFVQANRVRDEGYMRKLVKSYLDMLCIYKRDH
Nucleotide
Download Length: 618 bp
>NTDB_id=408997 GO174_RS10605 WP_024374317.1 2251064..2251681(+) (opaR) [Vibrio fluvialis strain 2015AW-0233]
ATGGACGCATCTATAGAGAAACGCCCTAGAACGCGGCTATCTCCTCAAAAACGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCCACCG
TGTTCAACTACTTCCCTACTCGTGAAGATTTGGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTCCTC
ACCGACAACATCGATCTCGATATCCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTCTCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCTAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGATATGCTGTGCATCTATAAACGCGATCACTAA
ATGGACGCATCTATAGAGAAACGCCCTAGAACGCGGCTATCTCCTCAAAAACGTAAACTCCAGTTGATGGAAATCGCGCT
GGAAGTGTTTGCAAAACGAGGCATTGGCCGTGGTGGTCATGCGGATATCGCAGAAATTGCTCAAGTTTCTGTCGCCACCG
TGTTCAACTACTTCCCTACTCGTGAAGATTTGGTCGACGACGTACTGACTTACGTGGTTCGCCAGTTTTCCAACTTCCTC
ACCGACAACATCGATCTCGATATCCACGCGAAAGAGAACCTCACCAACATCACCGATGAAATGGTTAAGCTGGCCAATGA
AGATTGCCACTGGCTGAAAGTGTGGTTTGAATGGAGCGCCTCGACGCGTGACGAAGTATGGCCACTGTTTGTCTCCAGTA
ACCGTACCAACCAGTTGCTGGTGAAGAACATGTTCTCGAAAGCCATCGAGCGCGGTGAAGTGTGTGAACAGCACGACCCT
GAAGATCTGGCGACGCTGTTCCACGGTGTCTGCTACTCACTGTTTGTGCAAGCTAACCGCGTTCGCGATGAAGGCTACAT
GCGTAAACTGGTGAAAAGCTACCTGGATATGCTGTGCATCTATAAACGCGATCACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
81.188 |
98.537 |
0.8 |
| hapR | Vibrio cholerae C6706 |
78.713 |
98.537 |
0.776 |
| hapR | Vibrio cholerae strain A1552 |
78.713 |
98.537 |
0.776 |