Detailed information NTG0408848

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: GPY12_RS19095
• Genome accession: NZ_CP046847
• Coordinates: 870597..873170 (-)
• Length: 857 a.a.
• NCBI ID: WP_001026296.1
• Uniprot ID: -
• Organism: Vibrio mimicus strain F9458
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 865597..878170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY12_RS19070	modA	866240..866998 (-)	759	WP_199250808.1	molybdate ABC transporter substrate-binding protein	-
GPY12_RS19075	-	867010..868473 (-)	1464	WP_148546495.1	cobyric acid synthase	-
GPY12_RS19080	-	868652..869050 (+)	399	WP_000831409.1	YgiW/YdeI family stress tolerance OB fold protein	-
GPY12_RS19085	-	869263..869781 (+)	519	WP_000932976.1	hypothetical protein	-
GPY12_RS19090	-	869940..870605 (+)	666	WP_148534152.1	flagellar brake protein	-
GPY12_RS19095	luxQ	870597..873170 (-)	2574	WP_001026296.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
GPY12_RS19100	luxP	873190..874287 (-)	1098	WP_022579009.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GPY12_RS19105	traF	874486..875646 (-)	1161	WP_148546493.1	conjugal transfer protein TraF	-
GPY12_RS19110	-	875747..876046 (-)	300	WP_000449703.1	GIY-YIG nuclease family protein	-
GPY12_RS19115	-	876046..876696 (-)	651	WP_148546492.1	YceH family protein	-
GPY12_RS19120	-	876739..876936 (-)	198	WP_001246067.1	hypothetical protein	-
GPY12_RS19125	-	877125..877445 (+)	321	WP_001089530.1	DUF496 family protein	-
GPY12_RS19130	-	877857..878108 (+)	252	WP_005520676.1	YgjV family protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 96850.70 Da
• Isoelectric Point: 5.7340

>NTDB_id=408848 GPY12_RS19095 WP_001026296.1 870597..873170(-) (luxQ) [Vibrio mimicus strain F9458]
MNIRPSQIKHKQRIASFITHAVVATLGVLILSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALKIHQDSTAK
NVSLISALASRQSGRLDEFFSSVDELELANAPDLRFISSNDKILWDDGNASFYGISVPEQNKLIRKVAISGNWHLVQTPS
DGKSIHLLVRRSSLIESGTGQVMGYLYVGIVLNDNFALVETIRSGSNSENLVLAVDSNLLVSTLKGNEPYTLDYVMNSAN
DAMNDSFIVGQTFLDVEGVPTYLCVYSIQPNKNVLTLRDNFYFWMAFALVSMIAVSIASRWWLQKRIQSEIETLMSYTHK
LMELDTKSQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTAGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPMITYAAQGKNPSEVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDVTSIAEAEKQSQVARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLTDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKSEFRLKELVC
AIDRIYRPLCNDKGIELVVESNITSATLVRSDQIRINQILFNLLNNAIKFTHQGSIRVALELIEGDPLAQLVIQVMDTGI
GIREEDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGHGTRFEIQLPIELVEMTATPQQLAPPQ
EPYRLFEKPLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKLHTYDLVLMDNQLPYLDGVETTKTIKQVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHYKNQYLNNNDRSN

Nucleotide

• Length: 2574 bp

>NTDB_id=408848 GPY12_RS19095 WP_001026296.1 870597..873170(-) (luxQ) [Vibrio mimicus strain F9458]
TTGAACATTCGACCTAGCCAGATCAAGCATAAACAGCGTATCGCTTCATTTATTACTCATGCGGTGGTCGCGACCTTGGG
CGTGTTGATCCTGAGTGTTTTATTCCAAAGCTATCAGATCAGTAGCCGCTTGATGGCACAAGAAGGGCAACGAACCTCAG
TCCAAACCTCAAGCTTGATACAAAGCTTGTTCGATTTTCGTCTAGCGGCACTCAAAATTCACCAAGACAGTACGGCAAAA
AATGTCAGTTTAATCAGTGCATTGGCCAGTAGACAGTCGGGTCGGTTGGATGAGTTCTTTTCCAGTGTTGATGAGCTTGA
ACTCGCTAATGCGCCCGATCTGCGTTTCATTTCGAGTAACGATAAAATCCTGTGGGATGATGGCAACGCCTCTTTTTATG
GGATCTCAGTACCTGAACAGAATAAGTTGATTCGCAAAGTGGCGATCAGTGGCAACTGGCATTTGGTACAAACCCCCAGT
GATGGTAAATCGATCCACCTTTTAGTGCGTCGCTCGTCACTGATTGAATCCGGCACCGGCCAAGTGATGGGCTACCTCTA
TGTTGGCATCGTGCTTAACGACAACTTTGCTTTAGTCGAAACCATACGCAGTGGCAGTAACTCTGAAAACCTCGTGTTGG
CGGTGGATTCTAATCTGCTGGTTTCTACGCTGAAAGGTAACGAGCCTTATACGTTGGATTACGTGATGAACAGTGCCAAC
GACGCAATGAACGACAGCTTTATTGTGGGGCAGACCTTTTTAGATGTGGAAGGTGTGCCAACCTACCTTTGTGTTTACTC
GATTCAGCCCAACAAAAATGTTCTGACCTTACGTGATAATTTTTATTTCTGGATGGCCTTTGCGCTCGTAAGCATGATTG
CAGTATCAATTGCATCACGCTGGTGGTTGCAAAAACGTATTCAGTCTGAAATCGAAACCTTAATGAGCTACACCCACAAG
CTGATGGAGTTAGATACAAAAAGTCAGTTCGCGGGGTCGAAAATCTATGAATTTGACTATTTTGGGCGAACTCTCGAGCA
GTCATTCCGCCGTTTGGCCAACAAAGAGAAGCAGTTTGAAGATCTCTTCAACTTTGCGCTGTCACCCACCATGTTATGGA
ATACGGCTGGTCGATTGATCCGTATGAACCCTTCGGCACAAATTCAGTTCTTGCGTGAAGATGCGCAGAATCATTTCTTA
TTTGAGATTCTTGAACGTCAATTATTGCCGATGATCACCTATGCGGCACAAGGTAAAAACCCTAGTGAAGTGACGACAGA
AGTGGATGGGCGAGTGTATCGCTGGAACCTTTCACCAATCATGGTGGAAGGGCAGATTATCTCGATTATTACCCAAGGTC
AGGATGTCACATCAATTGCTGAGGCAGAAAAGCAGAGCCAAGTAGCCAGACGTGAAGCCGAAGAGTCTGCGCGCGTGAGA
GCGGAATTTTTGGCCAAGATGAGCCACGAGCTGCGTACGCCGCTCAACGGTGTGTTAGGCGTTTCTCAATTGCTTAAACG
TACTCCACTCACGGATGAGCAGCGTGAGCATGTGGCGGTACTGTGTAGCAGTGGGGAGCATCTGCTGGCGGTGCTGAATG
ATATTCTGGATTTCTCTCGTCTGGAACAAGGTAAATTCCGCATTCAAAAGAGTGAATTCCGTCTTAAGGAATTAGTCTGC
GCGATTGATCGAATCTATCGTCCATTGTGTAACGACAAAGGGATAGAGCTGGTGGTGGAATCAAACATCACGAGTGCGAC
CTTAGTACGCAGCGACCAGATCCGTATTAATCAGATTCTGTTTAACTTGCTCAATAATGCGATCAAATTTACTCACCAAG
GTTCCATTCGAGTCGCTCTGGAATTGATTGAAGGTGATCCTTTAGCACAGCTGGTGATTCAGGTGATGGATACCGGGATT
GGGATTCGAGAAGAAGATCTGACCGTAATTTTTGAGCCATTTATGCAGGCGGAATCGACGACAACTCGTGAATACGGCGG
TAGTGGTTTGGGTTTAACCATAGTTCATAGCTTAGTTGAGATGCTCAGTGGGCAATTGCACGTGAGTTCAGAATATGGTC
ACGGCACACGCTTTGAGATTCAACTGCCGATAGAGTTGGTGGAAATGACTGCTACACCTCAACAGCTTGCTCCACCGCAA
GAGCCGTATCGATTATTTGAAAAACCGCTACGTGTGCTGCTTGTTGAGGATAACCATACTAATGCGTTCATCGCTCAAGC
GTTTTGTCGTAAATATGGTCTTGATGTTAGCTGGGTCACCGATGGTTTACAGGCGATTGAGGAGCTCAAGCTCCACACTT
ATGACTTGGTGTTGATGGATAATCAGCTACCTTATCTTGATGGCGTAGAAACGACGAAAACCATCAAACAGGTTCTGCAT
TTGCCTGTTGTGGTGTATGCCTGTACGGCAGATGGTCTGGAAGAAACACGTCAAGCCTTCTTCCATGCAGGTGCAGAGTA
CGTACTTGTTAAACCACTCAAAGAGCAAACTCTACATAAAGCATTAGAGCACTATAAAAACCAGTATCTCAATAACAACG
ATCGCTCAAATTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	89.566	99.533	0.891