Detailed information
Bioinformatically predicted
Overview
| Name | luxO | Type | Regulator |
| Locus tag | GPY12_RS05045 | Genome accession | NZ_CP046846 |
| Coordinates | 1078727..1080097 (+) | Length | 456 a.a. |
| NCBI ID | WP_005515571.1 | Uniprot ID | - |
| Organism | Vibrio mimicus strain F9458 | ||
| Function | promote HapR production (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1073727..1085097
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY12_RS05030 | - | 1074756..1075592 (+) | 837 | WP_148545927.1 | LysR family transcriptional regulator | - |
| GPY12_RS05040 | uvrB | 1076389..1078419 (+) | 2031 | WP_070382067.1 | excinuclease ABC subunit UvrB | - |
| GPY12_RS05045 | luxO | 1078727..1080097 (+) | 1371 | WP_005515571.1 | quorum-sensing sigma-54 dependent transcriptional regulator LuxO | Regulator |
| GPY12_RS05050 | luxU | 1080101..1080442 (+) | 342 | WP_001209533.1 | quorum-sensing phosphorelay protein LuxU | - |
| GPY12_RS05055 | - | 1080425..1081321 (-) | 897 | WP_070382065.1 | YvcK family protein | - |
| GPY12_RS05060 | moaA | 1081628..1082617 (+) | 990 | WP_187376460.1 | GTP 3',8-cyclase MoaA | - |
| GPY12_RS05065 | moaB | 1082678..1083190 (+) | 513 | WP_000509704.1 | molybdenum cofactor biosynthesis protein B | - |
| GPY12_RS05070 | moaC | 1083201..1083680 (+) | 480 | WP_000080913.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| GPY12_RS05075 | moaD | 1083677..1083922 (+) | 246 | WP_000598593.1 | molybdopterin synthase sulfur carrier subunit | - |
| GPY12_RS05080 | moaE | 1083924..1084388 (+) | 465 | WP_000370420.1 | molybdopterin synthase catalytic subunit MoaE | - |
Sequence
Protein
Download Length: 456 a.a. Molecular weight: 50935.26 Da Isoelectric Point: 5.7411
>NTDB_id=408821 GPY12_RS05045 WP_005515571.1 1078727..1080097(+) (luxO) [Vibrio mimicus strain F9458]
MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLHAVKQKSPDVPIVFMTAHGSI
DTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITG
ESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDL
QTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGF
MSKEEGKDFIRLSAEVVERFRHYEWPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMPEPVNRALPLANENKVVSVH
EIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQAWNEKVKEKEKER
MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLHAVKQKSPDVPIVFMTAHGSI
DTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITG
ESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDL
QTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGF
MSKEEGKDFIRLSAEVVERFRHYEWPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMPEPVNRALPLANENKVVSVH
EIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQAWNEKVKEKEKER
Nucleotide
Download Length: 1371 bp
>NTDB_id=408821 GPY12_RS05045 WP_005515571.1 1078727..1080097(+) (luxO) [Vibrio mimicus strain F9458]
ATGGTAGAAGATACGGCGTCGGTTGCGGCTCTGTATCGTTCTTACCTCACTCCACTGGATATTGATATCAATATCGTCGG
AACTGGACGCGATGCCATTGAAAGTATTGGCCGCCGCGAACCTGATTTGATCCTGCTTGATCTACGTTTGCCTGATATGA
CGGGTATGGACGTGTTACACGCAGTAAAACAAAAATCGCCCGATGTTCCCATCGTATTTATGACCGCACATGGCTCGATT
GATACAGCGGTTGAAGCGATGCGCCACGGTGCTCAAGACTTTTTGATTAAGCCTTGTGAAGCGGATCGTCTACGCGTAAC
AGTGAATAACGCGATTCGTAAAGCGTCGAAACTCAAAAACGACGTTGATAATAAAAATCAAAATTACCAAGGCTTTATCG
GCAGCAGCCAAACCATGCAAGCCGTATATCGCACTATCGATTCTGCGGCGAGCAGTAAAGCCAGTATCTTCATTACCGGC
GAAAGTGGTACAGGTAAAGAGGTGTGTGCCGAAGCGATTCATGCTGCGAGTAAACGAGGCGATAAACCGTTTATTGCAAT
TAACTGTGCAGCCATTCCTAAAGATCTGATCGAAAGTGAGCTATTTGGCCACGTAAAAGGGGCTTTTACGGGAGCGGCGA
CTGAACGCCAAGGGGCTGCTGAAGCTGCTGATGGTGGCACACTGTTTTTGGATGAGCTTTGCGAAATGGATTTGGATTTA
CAGACCAAACTACTGCGCTTCATCCAAACAGGGACTTTCCAAAAGGTCGGCTCTTCCAAAATGAAAAGCGTGGATGTGCG
CTTTGTTTGTGCAACCAACCGCGACCCATGGAAAGAAGTGCAAGAAGGCCGTTTTCGTGAAGACTTGTATTACCGTTTGT
ATGTGATCCCTCTGCATTTACCGCCATTGCGCGCGCGCGGTGATGATGTGATTGAAATTGCCTATTCGCTGCTTGGCTTC
ATGTCCAAAGAGGAAGGCAAGGACTTCATACGTTTGTCGGCGGAAGTGGTAGAACGCTTCCGTCACTATGAGTGGCCGGG
TAACGTGCGCCAACTGCAAAACGTATTGCGTAACGTTGTGGTGTTGAATGAAGGGCGTGAAATTACTTTGGATATGTTGC
CACCGCCGCTTAACCAAATGCCAGAGCCAGTTAATCGAGCGTTGCCTCTCGCGAATGAAAATAAAGTCGTGTCGGTGCAT
GAAATTTTCCCGTTGTGGATGACGGAAAAGCAAGCCATAGAACAAGCTATTGAAGCTTGTGATGGCAATATTCCTCGTGC
GGCAACGTATTTGGATGTCAGCCCATCGACTATTTACCGCAAGCTTCAAGCTTGGAATGAGAAAGTCAAAGAAAAAGAGA
AGGAGCGGTAA
ATGGTAGAAGATACGGCGTCGGTTGCGGCTCTGTATCGTTCTTACCTCACTCCACTGGATATTGATATCAATATCGTCGG
AACTGGACGCGATGCCATTGAAAGTATTGGCCGCCGCGAACCTGATTTGATCCTGCTTGATCTACGTTTGCCTGATATGA
CGGGTATGGACGTGTTACACGCAGTAAAACAAAAATCGCCCGATGTTCCCATCGTATTTATGACCGCACATGGCTCGATT
GATACAGCGGTTGAAGCGATGCGCCACGGTGCTCAAGACTTTTTGATTAAGCCTTGTGAAGCGGATCGTCTACGCGTAAC
AGTGAATAACGCGATTCGTAAAGCGTCGAAACTCAAAAACGACGTTGATAATAAAAATCAAAATTACCAAGGCTTTATCG
GCAGCAGCCAAACCATGCAAGCCGTATATCGCACTATCGATTCTGCGGCGAGCAGTAAAGCCAGTATCTTCATTACCGGC
GAAAGTGGTACAGGTAAAGAGGTGTGTGCCGAAGCGATTCATGCTGCGAGTAAACGAGGCGATAAACCGTTTATTGCAAT
TAACTGTGCAGCCATTCCTAAAGATCTGATCGAAAGTGAGCTATTTGGCCACGTAAAAGGGGCTTTTACGGGAGCGGCGA
CTGAACGCCAAGGGGCTGCTGAAGCTGCTGATGGTGGCACACTGTTTTTGGATGAGCTTTGCGAAATGGATTTGGATTTA
CAGACCAAACTACTGCGCTTCATCCAAACAGGGACTTTCCAAAAGGTCGGCTCTTCCAAAATGAAAAGCGTGGATGTGCG
CTTTGTTTGTGCAACCAACCGCGACCCATGGAAAGAAGTGCAAGAAGGCCGTTTTCGTGAAGACTTGTATTACCGTTTGT
ATGTGATCCCTCTGCATTTACCGCCATTGCGCGCGCGCGGTGATGATGTGATTGAAATTGCCTATTCGCTGCTTGGCTTC
ATGTCCAAAGAGGAAGGCAAGGACTTCATACGTTTGTCGGCGGAAGTGGTAGAACGCTTCCGTCACTATGAGTGGCCGGG
TAACGTGCGCCAACTGCAAAACGTATTGCGTAACGTTGTGGTGTTGAATGAAGGGCGTGAAATTACTTTGGATATGTTGC
CACCGCCGCTTAACCAAATGCCAGAGCCAGTTAATCGAGCGTTGCCTCTCGCGAATGAAAATAAAGTCGTGTCGGTGCAT
GAAATTTTCCCGTTGTGGATGACGGAAAAGCAAGCCATAGAACAAGCTATTGAAGCTTGTGATGGCAATATTCCTCGTGC
GGCAACGTATTTGGATGTCAGCCCATCGACTATTTACCGCAAGCTTCAAGCTTGGAATGAGAAAGTCAAAGAAAAAGAGA
AGGAGCGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxO | Vibrio cholerae strain A1552 |
97.807 |
100 |
0.978 |
| pilR | Pseudomonas aeruginosa PAK |
38.106 |
99.561 |
0.379 |