Detailed information NTG0040878

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SSUD12_RS04720
• Genome accession: NC_017621
• Coordinates: 933273..934343 (-)
• Length: 356 a.a.
• NCBI ID: WP_014637928.1
• Uniprot ID: -
• Organism: Streptococcus suis D12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 928273..939343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUD12_RS04695 (SSUD12_0915)	relB	929472..929723 (+)	252	WP_014637924.1	type II toxin-antitoxin system RelB family antitoxin	-
SSUD12_RS04700 (SSUD12_0916)	-	929707..929973 (+)	267	WP_014637925.1	type II toxin-antitoxin system RelE family toxin	-
SSUD12_RS04705 (SSUD12_0917)	braR	930012..930680 (+)	669	WP_024381849.1	response regulator transcription factor	Regulator
SSUD12_RS04710 (SSUD12_0918)	-	930677..931618 (+)	942	WP_014637927.1	sensor histidine kinase	-
SSUD12_RS04715 (SSUD12_0919)	-	931695..933203 (+)	1509	Protein_877	phosphomannomutase/phosphoglucomutase	-
SSUD12_RS04720 (SSUD12_0921)	xerS	933273..934343 (-)	1071	WP_014637928.1	tyrosine recombinase XerS	Machinery gene
SSUD12_RS04725 (SSUD12_0922)	-	934508..935023 (-)	516	WP_014637929.1	AAA family ATPase	-
SSUD12_RS04730 (SSUD12_0923)	-	935089..935829 (-)	741	WP_014637930.1	DUF3307 domain-containing protein	-
SSUD12_RS04735 (SSUD12_0924)	-	935833..936501 (-)	669	WP_014637931.1	SatD family protein	-
SSUD12_RS04740 (SSUD12_0926)	ffh	936695..938269 (-)	1575	WP_014637933.1	signal recognition particle protein	-
SSUD12_RS04745 (SSUD12_0927)	-	938282..938614 (-)	333	WP_014637934.1	putative DNA-binding protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41559.74 Da
• Isoelectric Point: 9.2257

>NTDB_id=40878 SSUD12_RS04720 WP_014637928.1 933273..934343(-) (xerS) [Streptococcus suis D12]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVTVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=40878 SSUD12_RS04720 WP_014637928.1 933273..934343(-) (xerS) [Streptococcus suis D12]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
CAAGTTGGCGGTCCCTTATAGTTTTACAACCTTATATGAATACTTGAAAGAATATCGTCGTTTTTTTGAGTGGTTACAGG
ATTCAGATTTGGTCACTGTTGAACGGATTGCTGACATTCCTCTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAG
GCCTTTATTCTTTATCTGCGGGAGCGTCCCCTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTGTCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGTTTTGCTAAGCCCTATCTGGAAGCCTACATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCACGCCAATACCCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.865	100	0.829