Detailed information
Bioinformatically predicted
Overview
| Name | hapR | Type | Regulator |
| Locus tag | GPY07_RS05220 | Genome accession | NZ_CP046840 |
| Coordinates | 1178208..1178819 (+) | Length | 203 a.a. |
| NCBI ID | WP_000340098.1 | Uniprot ID | B2CKP3 |
| Organism | Vibrio cholerae strain F9993 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1173208..1183819
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY07_RS05200 | - | 1173541..1174458 (-) | 918 | WP_000271063.1 | ABC transporter ATP-binding protein | - |
| GPY07_RS05205 | - | 1174842..1176488 (-) | 1647 | WP_000484911.1 | SulP family inorganic anion transporter | - |
| GPY07_RS05210 | can | 1176636..1177304 (+) | 669 | WP_001114117.1 | carbonate dehydratase | - |
| GPY07_RS05215 | hpt | 1177379..1177912 (-) | 534 | WP_000683351.1 | hypoxanthine phosphoribosyltransferase | - |
| GPY07_RS05220 | hapR | 1178208..1178819 (+) | 612 | WP_000340098.1 | quorum-sensing master transcriptional regulator HapR | Regulator |
| GPY07_RS05225 | rsmI | 1179033..1179899 (-) | 867 | WP_000131542.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GPY07_RS05230 | - | 1179969..1181774 (+) | 1806 | WP_001015481.1 | penicillin-binding protein activator | - |
| GPY07_RS05235 | - | 1181761..1182129 (+) | 369 | WP_001893625.1 | YraN family protein | - |
| GPY07_RS05240 | - | 1182133..1182723 (+) | 591 | WP_000887295.1 | phosphoheptose isomerase | - |
| GPY07_RS05245 | - | 1182726..1183295 (+) | 570 | WP_000836326.1 | BON domain-containing protein | - |
Sequence
Protein
Download Length: 203 a.a. Molecular weight: 23692.39 Da Isoelectric Point: 6.6356
>NTDB_id=408715 GPY07_RS05220 WP_000340098.1 1178208..1178819(+) (hapR) [Vibrio cholerae strain F9993]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNFVVRQYSNFL
TDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDV
DNMASLFHGIFYSIFLQVNRLGEQEAVYKLADSYLNMLCIYKN
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNFVVRQYSNFL
TDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDV
DNMASLFHGIFYSIFLQVNRLGEQEAVYKLADSYLNMLCIYKN
Nucleotide
Download Length: 612 bp
>NTDB_id=408715 GPY07_RS05220 WP_000340098.1 1178208..1178819(+) (hapR) [Vibrio cholerae strain F9993]
ATGGACGCATCAATCGAAAAACGCCCTCGAACTCGGCTATCGCCTCAAAAACGCAAACTACAACTGATGGAAATCGCGTT
GGAAGTGTTTGCTAAACGCGGCATTGGTCGTGGTGGTCACGCAGATATTGCCGAGATTGCGCAAGTCTCCGTTGCAACAG
TGTTCAACTACTTCCCAACTCGTGAAGACTTGGTTGACGATGTGCTGAATTTTGTGGTTCGTCAGTACTCCAACTTCTTG
ACCGATCACATCGATCTTGATTTGGATGTGAAAACCAACCTACAAACTCTGTGCAAAGAGATGGTGAAATTGGCGATGAC
CGATTGTCACTGGCTCAAAGTCTGGTTTGAGTGGAGTGCTTCAACCCGTGACGAAGTTTGGCCACTGTTTGTTTCCACCA
ACCGAACTAACCAACTGCTGATCAGAAACATGTTTATGAAAGCGATGGAGCGTGGCGAATTGTGTGAGAAACACGATGTC
GATAACATGGCCAGCCTGTTCCACGGCATCTTCTACTCCATCTTCTTACAAGTGAACCGTTTAGGTGAACAAGAAGCAGT
GTATAAGTTGGCCGATAGCTACCTCAATATGCTGTGTATCTATAAGAACTAG
ATGGACGCATCAATCGAAAAACGCCCTCGAACTCGGCTATCGCCTCAAAAACGCAAACTACAACTGATGGAAATCGCGTT
GGAAGTGTTTGCTAAACGCGGCATTGGTCGTGGTGGTCACGCAGATATTGCCGAGATTGCGCAAGTCTCCGTTGCAACAG
TGTTCAACTACTTCCCAACTCGTGAAGACTTGGTTGACGATGTGCTGAATTTTGTGGTTCGTCAGTACTCCAACTTCTTG
ACCGATCACATCGATCTTGATTTGGATGTGAAAACCAACCTACAAACTCTGTGCAAAGAGATGGTGAAATTGGCGATGAC
CGATTGTCACTGGCTCAAAGTCTGGTTTGAGTGGAGTGCTTCAACCCGTGACGAAGTTTGGCCACTGTTTGTTTCCACCA
ACCGAACTAACCAACTGCTGATCAGAAACATGTTTATGAAAGCGATGGAGCGTGGCGAATTGTGTGAGAAACACGATGTC
GATAACATGGCCAGCCTGTTCCACGGCATCTTCTACTCCATCTTCTTACAAGTGAACCGTTTAGGTGAACAAGAAGCAGT
GTATAAGTTGGCCGATAGCTACCTCAATATGCTGTGTATCTATAAGAACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hapR | Vibrio cholerae C6706 |
100 |
100 |
1 |
| hapR | Vibrio cholerae strain A1552 |
100 |
100 |
1 |
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
72.222 |
97.537 |
0.704 |