Detailed information NTG0408412

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: GPX85_RS09200
• Genome accession: NZ_CP046822
• Coordinates: 1191509..1192870 (+)
• Length: 453 a.a.
• NCBI ID: WP_158139024.1
• Uniprot ID: -
• Organism: Vibrio metschnikovii strain 07-2421
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 1186509..1197870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPX85_RS09185	-	1187436..1188674 (+)	1239	WP_199249797.1	dicarboxylate/amino acid:cation symporter	-
GPX85_RS09195	uvrB	1189335..1191365 (+)	2031	WP_040904511.1	excinuclease ABC subunit UvrB	-
GPX85_RS09200	luxO	1191509..1192870 (+)	1362	WP_158139024.1	quorum-sensing sigma-54 dependent transcriptional regulator LuxO	Regulator
GPX85_RS09205	luxU	1192878..1193225 (+)	348	WP_154168657.1	quorum-sensing phosphorelay protein LuxU	-
GPX85_RS09210	-	1193277..1194229 (+)	953	Protein_987	LysR substrate-binding domain-containing protein	-
GPX85_RS09215	-	1194531..1195733 (+)	1203	WP_154168655.1	NupC/NupG family nucleoside CNT transporter	-
GPX85_RS09220	folD	1195825..1196697 (-)	873	WP_158138136.1	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50621.70 Da
• Isoelectric Point: 5.3866

>NTDB_id=408412 GPX85_RS09200 WP_158139024.1 1191509..1192870(+) (luxO) [Vibrio metschnikovii strain 07-2421]
MVEDTASVAALYRSYLTPLEIDINIVSTGRDAIESLNRRTPDLILLDLRLPDMTGMDVLAAVKKQSPDVPIIFMTAHGSI
DTAVEAMRQGAQDFLIKPCEADRLRITVNNAMRKANKLKSENYDPNNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFIT
GESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAASDRQGAAELADGGTLFLDELCEMDLD
LQTKLLRFIQTGTFQKVGSSKLHSVDVRFVCATNRDPWKEVQQGRFREDLYYRLYVIPLHLPPLRERGDDVIEIAYSLLG
HMAKEEGKGFVRLSSEVTERFKHYEWPGNVRQLQNVLRNVVVLNDGQEITLSMLPPPLNAPRMAEPTFLSQDEKVLSVHD
IFPLWLTEKQAIEKAIEVCDGNIPRAASYLDVSPSTIYRKLQTWNEKEQEKER

Nucleotide

• Length: 1362 bp

>NTDB_id=408412 GPX85_RS09200 WP_158139024.1 1191509..1192870(+) (luxO) [Vibrio metschnikovii strain 07-2421]
ATGGTTGAGGATACGGCTTCTGTGGCAGCATTGTACCGATCCTATCTGACTCCGCTAGAGATTGACATTAATATCGTCAG
CACCGGGCGCGATGCGATAGAGAGCCTTAACCGACGAACGCCCGACTTAATCCTGTTAGATTTACGTTTGCCTGATATGA
CAGGAATGGATGTGCTTGCCGCTGTAAAAAAACAATCTCCCGATGTGCCGATCATCTTTATGACCGCACATGGTTCGATC
GATACTGCGGTCGAGGCGATGCGTCAAGGTGCACAAGACTTTCTGATTAAGCCGTGTGAGGCTGACCGGCTACGTATTAC
CGTCAATAATGCGATGCGCAAAGCGAATAAGCTTAAAAGCGAAAATTACGATCCAAATAATCAAAACTATCAAGGTTTTA
TTGGCAGTAGCCAAACGATGCAGGCGGTATATCGCACGATTGATTCCGCAGCGAGCAGTAAAGCCAGCATTTTTATTACC
GGTGAGAGTGGTACTGGTAAAGAAGTGTGCGCCGAAGCGATTCATGCCGCCAGTAAACGAGGCGACAAACCGTTTATCGC
CATCAACTGTGCTGCGATTCCAAAAGACTTAATTGAAAGTGAACTGTTTGGTCACGTCAAAGGTGCCTTTACCGGAGCCG
CCTCAGATAGACAAGGTGCTGCGGAGTTAGCTGATGGTGGAACGCTCTTTTTGGATGAGCTGTGCGAGATGGATCTTGAT
CTGCAAACCAAATTATTGCGTTTTATCCAGACTGGTACTTTTCAAAAAGTCGGCTCTTCTAAGCTACACAGTGTGGATGT
GCGCTTTGTTTGTGCGACGAACCGTGATCCCTGGAAAGAAGTTCAACAAGGCCGTTTTCGCGAAGACTTATATTACCGTT
TATACGTGATTCCATTACATTTACCGCCACTACGAGAACGGGGCGATGATGTGATTGAAATTGCTTATTCATTATTAGGT
CATATGGCGAAAGAGGAAGGCAAAGGATTTGTTCGTCTCTCTTCAGAAGTGACAGAGCGTTTTAAGCATTATGAATGGCC
AGGTAATGTGCGTCAGTTACAAAACGTACTGCGTAATGTCGTGGTATTGAATGATGGACAAGAAATTACCTTATCGATGC
TGCCTCCGCCACTCAATGCGCCAAGAATGGCAGAGCCTACCTTTTTGTCTCAGGATGAGAAGGTGCTTTCTGTGCATGAT
ATTTTTCCGTTATGGCTAACGGAAAAGCAAGCGATAGAAAAAGCCATTGAAGTGTGTGATGGCAATATTCCAAGAGCGGC
GAGTTATTTAGATGTCAGTCCCTCAACGATTTATCGCAAACTGCAAACCTGGAATGAAAAAGAGCAGGAAAAGGAGCGTT
AG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (134-299)

• Response regulator receiver domain (Response_reg) (2-108)

• Bacterial regulatory protein, Fis family (HTH_8) (404-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	87.305	99.117	0.865
pilR	Pseudomonas aeruginosa PAK	38.876	98.234	0.382