Detailed information NTG0408344

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: GPY06_RS04680
• Genome accession: NZ_CP046819
• Coordinates: 946138..947232 (+)
• Length: 364 a.a.
• NCBI ID: WP_158119289.1
• Uniprot ID: -
• Organism: Vibrio metoecus strain 2011V-1015
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 941138..952232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY06_RS04645	-	942304..942555 (-)	252	WP_001882582.1	YgjV family protein	-
GPY06_RS04650	-	942819..942968 (-)	150	WP_113602898.1	hypothetical protein	-
GPY06_RS04655	-	942968..943288 (-)	321	WP_001089529.1	DUF496 family protein	-
GPY06_RS04660	-	943476..943673 (+)	198	WP_001222790.1	hypothetical protein	-
GPY06_RS04665	-	943715..944365 (+)	651	WP_055029463.1	YceH family protein	-
GPY06_RS04670	-	944365..944670 (+)	306	WP_055035272.1	GIY-YIG nuclease family protein	-
GPY06_RS04675	traF	944771..945931 (+)	1161	WP_158119288.1	conjugal transfer protein TraF	-
GPY06_RS04680	luxP	946138..947232 (+)	1095	WP_158119289.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GPY06_RS04685	luxQ	947252..949822 (+)	2571	WP_158119290.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
GPY06_RS04690	-	949814..950479 (-)	666	WP_000268205.1	PilZ domain-containing protein	-
GPY06_RS04695	-	950633..951151 (-)	519	WP_055029468.1	hypothetical protein	-
GPY06_RS04700	-	951361..951759 (-)	399	WP_158119291.1	YgiW/YdeI family stress tolerance OB fold protein	-
GPY06_RS04705	-	951937..952074 (+)	138	Protein_911	hypothetical protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41440.27 Da
• Isoelectric Point: 6.3133

>NTDB_id=408344 GPY06_RS04680 WP_158119289.1 946138..947232(+) (luxP) [Vibrio metoecus strain 2011V-1015]
MKKKLMFSLLLTAALFSAEGYADSLKGYWHYDEFLAEFPEQHQLTDQLAKTVRDKPIPLGIEQKQPVVISVVYPGQQISD
YWVRNIKAFEKRMDELGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLQSSQTKLILQNI
TTPVKDWQGRQPMMYIGFDHELGALQLAKHYQAMAPSKPYSVLYFSEGYISEARGDTFIQQMNEVHRFQLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDIALGAAQALKELGRQDILLNGWGGGSAELEALANGELNMTVMRMNDDTGVAMAE
AIKWDLEGKMVPLVYSGDFEIVTQQDSAKHVEALKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=408344 GPY06_RS04680 WP_158119289.1 946138..947232(+) (luxP) [Vibrio metoecus strain 2011V-1015]
ATGAAAAAAAAGCTAATGTTCTCGCTGCTTTTAACAGCAGCACTCTTCAGTGCAGAAGGTTACGCCGATTCACTAAAAGG
TTATTGGCATTACGATGAGTTTCTCGCGGAGTTCCCCGAACAACATCAGTTGACGGATCAACTGGCGAAAACGGTTCGAG
ATAAACCGATCCCTCTTGGTATTGAGCAAAAACAACCCGTGGTGATTTCTGTTGTTTACCCAGGGCAACAAATCTCGGAC
TATTGGGTTCGGAACATCAAAGCTTTTGAAAAAAGGATGGATGAACTCGGGATTCGCTACCAAATTAATCAAGTCTTTAC
TCGCCCTAATCTCGATACTCGCCAACAAAGTGTTTCATTGATGGAAGCACTCAAAAACAAAAGCGATTATCTGATCTTTA
CACTAGATACGACGCGTCATCGCAAGTTTATTGAGCACGTACTACAGTCATCGCAAACTAAATTGATATTACAAAACATC
ACGACGCCAGTGAAAGATTGGCAAGGCCGACAGCCCATGATGTATATCGGTTTCGACCATGAGTTAGGGGCGCTGCAATT
AGCGAAACACTACCAAGCTATGGCTCCGAGTAAACCATACTCGGTACTCTATTTCTCTGAGGGCTATATCAGCGAAGCGC
GCGGAGATACGTTCATTCAACAAATGAATGAAGTGCACCGTTTTCAGCTCGCCTCTTCTTATTACACTAAGGCGACCGAG
CAAAGTGGGTATGAGGCGACCTTGAACATAGTCAAGAACAACCCAGAAATTGGGTTTATTTATGCGTGTGCCACAGACAT
TGCTTTGGGCGCAGCTCAAGCGTTAAAAGAACTGGGGCGGCAGGATATTCTACTCAATGGTTGGGGTGGGGGCTCTGCGG
AGTTGGAGGCGTTGGCCAATGGCGAACTCAATATGACCGTGATGCGTATGAATGATGATACGGGAGTGGCGATGGCGGAA
GCGATTAAATGGGATCTGGAAGGCAAAATGGTGCCTTTGGTATATTCCGGAGATTTTGAAATCGTGACTCAACAAGACTC
CGCCAAACACGTTGAAGCATTGAAAGCCCGCGCGTTTCGTTATTCAGATCGCTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-322)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	85.44	100	0.854