Detailed information NTG0407986

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: GPY18_RS03860
• Genome accession: NZ_CP046799
• Coordinates: 850881..853448 (+)
• Length: 855 a.a.
• NCBI ID: WP_020433712.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain 2012V-1235
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 845881..858448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY18_RS03830	-	846604..846921 (-)	318	WP_020329287.1	DUF496 family protein	-
GPY18_RS03835	-	847111..847308 (+)	198	WP_020329288.1	hypothetical protein	-
GPY18_RS03840	-	847353..847988 (+)	636	WP_020433719.1	YceH family protein	-
GPY18_RS03845	-	847999..848280 (+)	282	WP_055453770.1	GIY-YIG nuclease family protein	-
GPY18_RS03850	-	848394..849550 (+)	1157	Protein_768	conjugal transfer protein TraF	-
GPY18_RS03855	luxP	849762..850859 (+)	1098	WP_024375537.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GPY18_RS03860	luxQ	850881..853448 (+)	2568	WP_020433712.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
GPY18_RS03865	-	853454..854134 (-)	681	WP_158146147.1	flagellar brake protein	-
GPY18_RS03870	-	854269..854793 (-)	525	WP_158146148.1	hypothetical protein	-
GPY18_RS03875	-	854946..855320 (-)	375	WP_020433707.1	NirD/YgiW/YdeI family stress tolerance protein	-
GPY18_RS03880	-	855486..856970 (+)	1485	WP_158146149.1	cobyric acid synthase	-
GPY18_RS03885	modA	856967..857752 (+)	786	WP_158146150.1	molybdate ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 855 a.a.
• Molecular weight: 96307.77 Da
• Isoelectric Point: 5.0360

>NTDB_id=407986 GPY18_RS03860 WP_020433712.1 850881..853448(+) (luxQ) [Vibrio fluvialis strain 2012V-1235]
MGIRSSTVKQKRKIATFISRAIVTVLGALTLTVLFQSYQISSRLISQEVARTSTQTSSLIQNLFNYRLATLQIHQDSSAK
NASLIQALHGDTNDALDQYFLSVDQLELNNTPDIRFITDLKEMVWEDGNSQFYGVQSKELNAIIRKVSISSNWHLIQTPS
ELGTAYLLVRRSPIVDTATGEVIGFLYVSIVLNNNFALIETIRDSSNSQNLILTVGSEVLASTLNGDESYTAFDVLQDGM
SDMLYDKNMVAKTVLEVEGVPTYLSVYSVQSNENALSLRDNYYFWMVFALVAMVGVSILTRWWLQRRIESEIEGLMTYTH
KVAERGLDDFFPGSKIYEFDHFGRTLEHTFQRLSAQEKQFEDLFNFALSPTILWTADGELIRMNPSAQKHFLRNNAEYHS
LFSVLKRQLIPQIKLAAKGEILKEVNTEVDDKVFLWNLSPIVVENRIESIITQGQDVTSIAEAEKQSRIARREAEESARV
RADFLAKMSHELRTPLNGILGVSQLLKRTVKEKEQAEQVNVLCSSGEHLLAVLNDILDFSKIEQGKFRIQKTHFPLVDVV
SAIERIYRPLCREKGLDLSIDSNIDQTMIVNADQVRLNQILFNLLNNAVKFTHQGAISIQLNLLQEAGDTRLSISVMDTG
IGIRDADLNIIFEPFVQAESTNTREYGGSGLGLAIVHSLIEMLGGTVQVSSTFGVGTRFNIELPMERVTSEKQSIERKEA
ASRYELFDGSIHVLLVEDNHTNAFIAQAFCKKYGMVVDWVTDGLQAIEKVKEQRYDLILMDNQLPYLDGVDATRIIKQEM
GLEIPVYACTADGVVETQQAFMSAGAEYVIVKPIKEDTLHKALVNFKQDHTEWSV

Nucleotide

• Length: 2568 bp

>NTDB_id=407986 GPY18_RS03860 WP_020433712.1 850881..853448(+) (luxQ) [Vibrio fluvialis strain 2012V-1235]
GTGGGCATCAGATCAAGCACAGTCAAACAGAAAAGAAAAATCGCAACGTTCATCAGCCGAGCGATTGTGACGGTGCTTGG
TGCGCTGACGTTGACGGTGCTGTTTCAAAGCTATCAAATCAGCAGTCGTTTGATCTCACAGGAAGTGGCCCGCACTTCAA
CTCAAACCTCCAGCCTGATTCAGAACCTGTTCAATTACCGATTGGCCACGCTGCAGATTCATCAGGACAGTAGCGCAAAA
AATGCCAGCCTGATTCAGGCGTTGCACGGCGATACTAATGACGCACTGGATCAGTACTTTCTCAGTGTTGACCAGCTTGA
ACTCAACAATACGCCGGATATTCGTTTCATTACCGACCTCAAAGAGATGGTATGGGAAGACGGCAACTCTCAGTTTTATG
GGGTTCAGTCGAAAGAGCTCAATGCCATCATCCGAAAAGTGTCAATCAGCAGTAACTGGCACCTAATCCAAACACCTTCA
GAGTTAGGCACGGCCTACCTGTTGGTTCGCCGCTCACCGATTGTGGATACCGCAACCGGCGAAGTCATCGGTTTTCTCTA
CGTCAGTATTGTACTCAACAACAACTTTGCGTTAATCGAGACCATTCGTGACAGCAGTAACTCGCAGAATCTGATTCTGA
CAGTTGGTTCAGAAGTTTTGGCGTCGACTCTGAATGGAGACGAATCCTATACAGCGTTCGATGTGTTGCAGGACGGTATG
AGCGACATGCTGTACGACAAAAACATGGTGGCGAAAACGGTTCTGGAAGTGGAAGGGGTGCCGACGTATCTCAGTGTTTA
CTCAGTGCAGAGCAACGAGAATGCGTTGAGCCTGCGTGACAACTACTATTTCTGGATGGTTTTTGCGCTGGTGGCGATGG
TCGGTGTCTCCATTCTGACGCGTTGGTGGTTGCAGCGACGAATTGAGTCGGAAATTGAAGGGCTGATGACCTACACCCAT
AAAGTGGCAGAGCGTGGACTGGATGACTTCTTCCCCGGCTCAAAAATTTACGAATTTGACCACTTCGGTCGCACGCTGGA
ACACACTTTCCAACGCCTGTCTGCGCAGGAAAAGCAATTTGAGGATCTGTTTAACTTCGCTCTGTCGCCAACCATTCTCT
GGACGGCAGACGGTGAGCTGATTCGTATGAACCCGTCGGCTCAGAAGCATTTTTTACGCAATAATGCGGAATATCATTCC
TTGTTCTCTGTGCTGAAACGTCAGTTGATCCCGCAGATCAAACTGGCGGCAAAAGGCGAGATTCTCAAAGAAGTGAACAC
CGAAGTCGACGACAAAGTGTTCCTGTGGAACCTGTCGCCGATTGTGGTGGAGAACCGTATCGAATCGATTATTACTCAGG
GCCAGGATGTCACCTCGATTGCAGAAGCGGAAAAACAGAGCCGTATTGCACGTAGAGAAGCGGAAGAGTCGGCACGCGTC
AGAGCGGATTTCCTCGCGAAAATGAGCCATGAGCTGAGAACGCCACTGAACGGGATTCTGGGTGTGTCTCAACTCCTTAA
GCGTACAGTGAAGGAAAAAGAGCAGGCCGAGCAGGTTAACGTACTGTGCAGCAGTGGTGAACATCTGCTGGCAGTACTGA
ATGACATTCTGGATTTCTCAAAGATAGAGCAGGGTAAATTCCGGATTCAGAAGACCCATTTCCCGTTGGTCGATGTGGTG
TCGGCCATTGAACGAATTTATCGTCCATTGTGTCGTGAGAAAGGCTTGGATCTCTCGATTGACAGCAATATCGACCAAAC
AATGATTGTAAATGCGGACCAGGTACGTCTGAATCAGATTCTGTTTAATCTGCTCAATAACGCCGTGAAGTTTACCCATC
AGGGCGCCATCAGCATTCAGCTGAATCTGTTGCAAGAGGCGGGCGACACTCGCCTGTCCATTTCGGTCATGGACACAGGT
ATTGGCATTCGTGATGCAGATTTGAATATCATCTTTGAGCCGTTTGTTCAGGCAGAATCGACCAATACCCGCGAATATGG
CGGCAGTGGATTGGGGCTGGCCATTGTGCACAGCCTTATTGAAATGCTTGGCGGCACGGTGCAGGTCAGCTCGACGTTTG
GTGTAGGCACACGTTTTAATATCGAATTGCCGATGGAACGTGTTACCTCTGAAAAGCAGTCGATTGAGCGCAAAGAAGCT
GCATCACGTTACGAACTGTTCGATGGCAGCATTCATGTTCTGCTGGTTGAAGACAACCATACCAACGCGTTTATCGCACA
GGCCTTCTGCAAAAAATATGGCATGGTCGTCGACTGGGTCACGGATGGATTGCAGGCGATCGAAAAGGTCAAAGAGCAGC
GTTACGATCTGATTCTGATGGACAACCAACTACCGTATCTCGACGGTGTGGATGCCACGCGCATCATCAAACAAGAAATG
GGCTTAGAAATACCAGTTTACGCCTGTACCGCAGATGGCGTGGTGGAAACTCAGCAAGCGTTTATGTCTGCCGGTGCAGA
ATACGTGATCGTCAAGCCGATCAAAGAAGATACGCTGCACAAAGCTTTGGTGAACTTTAAACAAGACCATACCGAGTGGT
CTGTGTAA

Domains

Predicted by InterproScan.

• LuxQ, periplasmic (LuxQ-periplasm) (41-278)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (593-706)

• Response regulator receiver domain (Response_reg) (733-843)

• His Kinase A (phospho-acceptor) domain (HisKA) (481-545)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	63.498	99.649	0.633