Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | GPY43_RS09415 | Genome accession | NZ_CP046797 |
| Coordinates | 2046341..2046958 (+) | Length | 205 a.a. |
| NCBI ID | WP_014204466.1 | Uniprot ID | A0A0Q2MAY4 |
| Organism | Vibrio furnissii strain 2013V-1001 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2041341..2051958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY43_RS09390 | panC | 2041784..2042665 (+) | 882 | WP_004729048.1 | pantoate--beta-alanine ligase | - |
| GPY43_RS09395 | - | 2042740..2043510 (-) | 771 | WP_004729049.1 | ABC transporter permease | - |
| GPY43_RS09400 | - | 2043516..2044433 (-) | 918 | WP_143680351.1 | ABC transporter ATP-binding protein | - |
| GPY43_RS09405 | can | 2044777..2045445 (+) | 669 | WP_004729053.1 | carbonate dehydratase | - |
| GPY43_RS09410 | hpt | 2045493..2046020 (-) | 528 | WP_004729056.1 | hypoxanthine phosphoribosyltransferase | - |
| GPY43_RS09415 | opaR | 2046341..2046958 (+) | 618 | WP_014204466.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| GPY43_RS09420 | lpdA | 2047077..2048504 (-) | 1428 | WP_154180383.1 | dihydrolipoyl dehydrogenase | - |
| GPY43_RS09425 | aceF | 2048777..2050669 (-) | 1893 | WP_158107761.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23851.20 Da Isoelectric Point: 6.2312
>NTDB_id=407948 GPY43_RS09415 WP_014204466.1 2046341..2046958(+) (opaR) [Vibrio furnissii strain 2013V-1001]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFANRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDMHAKDNIANITREMVRLANDDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLLKNMFSKAIERGEVCEQHDA
DDLATLFHGVCYSLFVQANRVRDEGYMQKLVKSYLDMLCIYKRDH
MDASIEKRPRTRLSPQKRKLQLMEIALEVFANRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTYVVRQFSNFL
TDNIDLDMHAKDNIANITREMVRLANDDCHWLKVWFEWSASTRDEVWPLFVSSNRTNQLLLKNMFSKAIERGEVCEQHDA
DDLATLFHGVCYSLFVQANRVRDEGYMQKLVKSYLDMLCIYKRDH
Nucleotide
Download Length: 618 bp
>NTDB_id=407948 GPY43_RS09415 WP_014204466.1 2046341..2046958(+) (opaR) [Vibrio furnissii strain 2013V-1001]
ATGGACGCATCGATAGAGAAACGCCCTAGAACGCGGCTATCTCCCCAAAAACGTAAACTTCAGTTGATGGAAATCGCGCT
GGAAGTATTTGCAAATCGTGGGATTGGTCGTGGCGGTCACGCCGACATCGCAGAAATTGCTCAAGTTTCTGTCGCGACCG
TATTCAACTATTTCCCAACGCGCGAAGATTTGGTCGACGACGTGCTCACTTACGTGGTTCGTCAGTTCTCCAACTTCCTG
ACCGACAACATCGATCTGGACATGCACGCAAAAGACAACATTGCGAACATCACCCGCGAAATGGTTCGTCTGGCCAATGA
CGATTGCCACTGGCTGAAAGTGTGGTTTGAGTGGAGCGCATCCACCCGTGATGAAGTGTGGCCCCTGTTTGTGTCAAGCA
ACCGCACCAACCAACTGCTGCTGAAAAACATGTTCTCAAAAGCGATTGAACGGGGTGAAGTATGCGAGCAACACGATGCA
GATGATCTGGCGACGCTGTTCCATGGCGTGTGCTACTCCCTGTTCGTGCAAGCAAACCGTGTACGCGATGAAGGCTACAT
GCAGAAGCTGGTGAAGAGCTACCTCGACATGCTGTGCATCTATAAACGCGATCACTAA
ATGGACGCATCGATAGAGAAACGCCCTAGAACGCGGCTATCTCCCCAAAAACGTAAACTTCAGTTGATGGAAATCGCGCT
GGAAGTATTTGCAAATCGTGGGATTGGTCGTGGCGGTCACGCCGACATCGCAGAAATTGCTCAAGTTTCTGTCGCGACCG
TATTCAACTATTTCCCAACGCGCGAAGATTTGGTCGACGACGTGCTCACTTACGTGGTTCGTCAGTTCTCCAACTTCCTG
ACCGACAACATCGATCTGGACATGCACGCAAAAGACAACATTGCGAACATCACCCGCGAAATGGTTCGTCTGGCCAATGA
CGATTGCCACTGGCTGAAAGTGTGGTTTGAGTGGAGCGCATCCACCCGTGATGAAGTGTGGCCCCTGTTTGTGTCAAGCA
ACCGCACCAACCAACTGCTGCTGAAAAACATGTTCTCAAAAGCGATTGAACGGGGTGAAGTATGCGAGCAACACGATGCA
GATGATCTGGCGACGCTGTTCCATGGCGTGTGCTACTCCCTGTTCGTGCAAGCAAACCGTGTACGCGATGAAGGCTACAT
GCAGAAGCTGGTGAAGAGCTACCTCGACATGCTGTGCATCTATAAACGCGATCACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
80.198 |
98.537 |
0.79 |
| hapR | Vibrio cholerae C6706 |
77.723 |
98.537 |
0.766 |
| hapR | Vibrio cholerae strain A1552 |
77.723 |
98.537 |
0.766 |