Detailed information NTG0407947

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: GPY43_RS09255
• Genome accession: NZ_CP046797
• Coordinates: 2001903..2005295 (+)
• Length: 1130 a.a.
• NCBI ID: WP_041942483.1
• Uniprot ID: -
• Organism: Vibrio furnissii strain 2013V-1001
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1996903..2010295

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY43_RS09235	erpA	1997261..1997602 (-)	342	WP_014204486.1	iron-sulfur cluster insertion protein ErpA	-
GPY43_RS09240	hemL	1997914..1999206 (+)	1293	WP_014204485.1	glutamate-1-semialdehyde 2,1-aminomutase	-
GPY43_RS24215	-	1999303..1999425 (-)	123	WP_004728990.1	hypothetical protein	-
GPY43_RS09245	-	1999501..2000586 (+)	1086	WP_004728992.1	AI-2E family transporter	-
GPY43_RS09250	rsmC	2000682..2001704 (+)	1023	WP_014204483.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
GPY43_RS09255	chiS	2001903..2005295 (+)	3393	WP_041942483.1	response regulator	Regulator
GPY43_RS09260	-	2005994..2007664 (+)	1671	WP_004728998.1	ABC transporter substrate-binding protein	-
GPY43_RS09265	-	2007829..2008814 (+)	986	Protein_1835	ABC transporter permease	-
GPY43_RS09270	-	2008817..2009840 (+)	1024	Protein_1836	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 128116.52 Da
• Isoelectric Point: 6.2694

>NTDB_id=407947 GPY43_RS09255 WP_041942483.1 2001903..2005295(+) (chiS) [Vibrio furnissii strain 2013V-1001]
MFRFNRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVIDYLSAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGVDIDQAREHAQQRYVTGSGDEVKTSVLPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDITGNVVYSIYKRENYGTNLLTGRFKDSNLGQTFRQLEQQVSEHRKTNEDYTPVVLSDFVDEQGRQFAWMGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNTTSSMRTLLVGQDHRSRTLAYDQPEIDKSTQVIDWALNGSRSVGTYTNLDDEK
TIAAYAPINLKDLHWALVVELPEKEAFARIRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TMINTDRRDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQVIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALTSGANGPINAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDIHRTAVNLSNATRLVLELSNHLLGKKQIRI
INQVAEEAPVWVSADAQRLEQVLYNLIGNAIKYTSEGKIVISATRVDQHIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDT
SRYRQGAGLGLSISRQLIELMQGSLYVSSQPMVGTTFSFTLPMASDDEIAQAQLTQQPHFQAPELTELDLPDHHSIPENP
TGPLLLVADDEPVNLRVLDSFLRLEGYRVRTAQDGNEVLQAVAEEKPELLLLDIMMPGMSGYQVCEELRKTYDHAALPVI
MLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAEQRRLENAELQKELKHRAMVEASLLETQGRLLEQL
ESAPEAIVCIREDNKVRFANDAAARLFKRSQEQLKRSNADELIAQKYLLVEQDHYCGNVDIFIDDTRQHVNADVLRLPKG
AGLQAMYIFNVGGNINAARIHNLETAVEALSSYAFDGDKDKLQQLKELGGEFTRLADKASGDGQSKQELMRSVLVDAMTS
ALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEQGPERTYIEVQR
DKLQKLLTSE

Nucleotide

• Length: 3393 bp

>NTDB_id=407947 GPY43_RS09255 WP_041942483.1 2001903..2005295(+) (chiS) [Vibrio furnissii strain 2013V-1001]
ATGTTTAGGTTCAATCGGAAGCAAAAGTTTAAGCGCCTGCAAAATACCCTCATGCTCGCGTTCTTGGTTCTTAGCATCAC
CCCATTGACGGTGACGGCGATTTTTTTCCTTCAATCTCACAGTAAAGATCTTCAGGAACAAAGCACATCGCACCTTCTTT
CGGTCCGTGATACGAAGCAACAGCAAGTCATCGACTACCTCAGCGCGAAAGAGTCTGAAGTCATGGGCTTTGTTCGCTCA
GAACTGGCTTACGCCAGTGGCGGGCGTTTCTATGGTTTAGTAAACGCATTTCAACGCTTAGGCGTTGATATCGACCAAGC
ACGAGAGCATGCACAGCAGCGCTACGTCACCGGTTCTGGTGATGAAGTCAAAACCTCCGTGCTACCAGAATCGAGCAGTT
ATGTCGGCAGTGAGCGCTATCGCCTTCTGCACAAACGCTACCATTGGGCCTATCTCGAGCTACTCAAACGGTCCGACTTT
GACGATATTCTGTTGGTCGATATCACCGGCAACGTGGTGTACTCCATCTACAAGCGTGAGAACTACGGCACCAACTTGCT
CACGGGGCGATTCAAAGACAGTAACTTAGGGCAAACCTTCCGCCAGTTGGAACAGCAAGTCAGTGAGCATCGAAAAACCA
ACGAAGATTACACACCAGTGGTGTTGTCGGACTTTGTCGATGAACAAGGCCGTCAATTTGCTTGGATGGGCGCCCCCATT
ATTCAACAAGGCTATCTGCACAGCTACGCCATGTTCCGTTTACCCAACAACGGCATCACCAAGCTGATCGCAGACACCAA
CACCACGTCATCGATGCGCACGTTATTGGTCGGTCAGGATCATCGTTCACGCACGCTGGCTTATGATCAACCGGAAATCG
ACAAAAGTACGCAAGTGATTGATTGGGCGCTCAATGGCAGCCGATCCGTCGGCACGTACACCAACCTTGATGACGAGAAA
ACCATCGCCGCTTACGCGCCGATCAATCTCAAGGATCTGCATTGGGCGTTGGTGGTCGAACTGCCTGAAAAAGAAGCTTT
CGCACGCATTCGTCAACTGGAAAAACTGTTCATCTTCGCGATGCTGACTGCCATTATTTTGGTGGTGATTGCCTCACATT
ACCTGTCGAACTTCATCACCTCACCCCTGCTAAAACTGACATGGGCCGCTGAACGCGTGTCGGCTGGCGATTTAGATGAA
ACCATGATCAATACCGATCGGCGTGATGAAATTGGGCGACTGGCGGTCAGTTTTGAACGCATGCAGCGCTCGATTCGCGA
AAAAATGCAGCTGATTAAGGCGCAGAATAAAGAGCTCGAAAGCAACATTCAGGTCATCCGTAAACAGAATGATGAGTTGC
AACTGGCAAACAAACTCAAAGATGAGTTTCTGGCCACAACATCCCATGAGCTGCGAACCCCACTGCATGGCATGATCGGG
ATTGCCGAAGCACTGACTTCCGGCGCCAATGGCCCAATCAACGCTGCGCATAAGTATCAACTCGACATCATCATCAGCAG
CGGGCAACGTTTGGCCACACTGGTCGATGACCTACTCGATTACCACAAAATGCGTTATGGCAATCTGGATATTCATCGCA
CGGCTGTCAATCTCTCTAATGCCACACGTTTGGTTTTGGAGCTGTCAAATCACCTGTTGGGTAAAAAACAGATTCGCATC
ATCAATCAGGTCGCAGAAGAAGCGCCGGTATGGGTCTCTGCTGATGCGCAGCGTCTTGAGCAAGTGTTGTACAACTTGAT
TGGCAACGCGATCAAATACACATCCGAAGGCAAGATTGTCATTTCTGCCACTCGCGTTGACCAACACATTCGCGTACAAG
TGGTGGATACCGGACAAGGGATTCCGGCAGAGCAATTGGAACATATTTTCGAACCCCTGATTCAAGCCGGGCACGACACC
AGTCGCTACCGCCAAGGGGCCGGACTGGGCCTCTCGATCAGCCGTCAGTTGATCGAGCTGATGCAAGGGTCGCTGTATGT
CAGCAGTCAACCCATGGTCGGAACGACGTTTAGCTTCACACTGCCGATGGCCTCCGACGACGAAATCGCCCAAGCGCAGT
TGACGCAACAACCGCACTTCCAAGCGCCTGAATTGACTGAACTGGATCTGCCAGACCATCACAGCATTCCGGAGAATCCA
ACCGGGCCGTTGCTCTTGGTGGCTGATGATGAGCCGGTGAACTTACGCGTGCTCGATAGCTTCCTGCGTCTTGAAGGCTA
TCGCGTGCGCACCGCTCAGGATGGGAACGAAGTCCTGCAGGCCGTCGCAGAAGAGAAACCTGAATTGTTGCTACTGGACA
TCATGATGCCCGGCATGAGCGGCTATCAGGTGTGTGAAGAGCTGCGTAAAACGTACGATCATGCAGCGTTGCCAGTCATC
ATGCTCACCGCGCTCAATCAATCCGATGACCGAGTGCGCGGCTTTGAAGCCGGCGCCAACGATTATCTATCCAAACCGTT
CAATAAGCAGGAATTAGCCGCACGTATCGTCGCGCACTTGACCGCAAGTAAAGCGGAACAACGTCGCCTTGAGAACGCGG
AACTGCAAAAAGAACTCAAACATCGCGCCATGGTGGAAGCAAGCTTGCTGGAAACACAAGGCCGACTGCTGGAACAGCTG
GAATCAGCGCCAGAAGCGATTGTGTGCATTCGGGAAGACAACAAAGTTCGCTTTGCCAATGACGCCGCAGCGCGCCTGTT
TAAACGCAGTCAGGAACAACTCAAGCGCTCCAACGCTGACGAATTGATTGCGCAAAAATACTTGTTGGTCGAACAGGATC
ACTATTGTGGCAATGTCGACATTTTCATCGATGACACGCGCCAACACGTGAACGCCGATGTCTTGCGCCTCCCCAAAGGC
GCTGGATTACAAGCGATGTATATCTTTAATGTCGGCGGTAACATTAACGCGGCGCGCATCCACAACCTTGAAACGGCGGT
TGAAGCCCTATCAAGTTACGCGTTTGACGGTGACAAAGACAAATTGCAACAGCTCAAAGAGCTGGGCGGTGAATTCACAC
GCTTAGCCGACAAAGCCTCCGGTGACGGCCAATCCAAACAAGAGTTGATGCGTTCCGTGCTGGTCGATGCCATGACCTCC
GCCCTCAACTACTGGGAAAGAGTCTCCGGTCAAAGCAAGTTCACCTTTGCTGAACAAAGTGGGCTGTGGCGCGTCTACCT
CGATCGCAGTACGCTGCAAACTCGAACACTCGACAAATACCTGCGTATCGAAACACTGCCTAAAACGCCGCGTTGGCGCA
CCGTGCTTAACTCGTTAGATTACATTCTGGATCACTGCCAGGAACAAGGACCAGAACGCACTTACATTGAAGTGCAACGG
GATAAGTTACAAAAGCTACTGACGTCAGAATAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS fold (PAS) (877-923)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (575-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	84.248	100	0.842