Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   HZZ00_RS34530 Genome accession   NZ_CP058977
Coordinates   7862709..7863833 (+) Length   374 a.a.
NCBI ID   WP_180329985.1    Uniprot ID   -
Organism   Streptomyces sp. NEAU-sy36     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 7857709..7868833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HZZ00_RS34515 (HZZ00_34515) - 7858181..7859020 (+) 840 WP_070022501.1 hypothetical protein -
  HZZ00_RS34520 (HZZ00_34520) - 7859251..7861017 (-) 1767 WP_257585522.1 hypothetical protein -
  HZZ00_RS34525 (HZZ00_34525) radA/sms 7861219..7862628 (+) 1410 WP_180329984.1 DNA repair protein RadA Machinery gene
  HZZ00_RS34530 (HZZ00_34530) disA 7862709..7863833 (+) 1125 WP_180329985.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HZZ00_RS34535 (HZZ00_34535) - 7863888..7864712 (-) 825 WP_180329986.1 hypothetical protein -
  HZZ00_RS34540 (HZZ00_34540) - 7864892..7865767 (+) 876 WP_180329987.1 A/G-specific adenine glycosylase -
  HZZ00_RS34545 (HZZ00_34545) - 7866055..7866594 (+) 540 WP_070022497.1 SigE family RNA polymerase sigma factor -
  HZZ00_RS34550 (HZZ00_34550) - 7866582..7867241 (+) 660 WP_257585523.1 hypothetical protein -
  HZZ00_RS34555 (HZZ00_34555) cseB 7867297..7868004 (+) 708 WP_180329989.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40047.82 Da        Isoelectric Point: 5.0018

>NTDB_id=407920 HZZ00_RS34530 WP_180329985.1 7862709..7863833(+) (disA) [Streptomyces sp. NEAU-sy36]
MAANDRAAAPGKSGGSAGSDRLMRASLSAVAPGTAMRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEQALAELDALTQAELIEVGTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=407920 HZZ00_RS34530 WP_180329985.1 7862709..7863833(+) (disA) [Streptomyces sp. NEAU-sy36]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATCGCCTGATGCGCGCCTCGCT
GAGCGCCGTGGCACCCGGTACGGCCATGCGGGACGGCCTGGAGCGCGTGCTGCGCGGCAACACCGGCGGACTGATCGTGC
TCGGCTCCGACAAGACCGTAGAGGCGATGTGCACGGGCGGGTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCGTCGGACCTGTCGAAGATCCTGCGCGCGGGCGTCCAGCTGGTCCC
GGACCCGACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TGGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTCTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTCTCCCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTGGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGTCCGCCGTCGCGCAGCGCCTGGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGCCTCCTCGCCCTCCAGCTGGAGGAGTTGATCGCG
GGGGTCGAGCCGGACCGGGAGCTGGTGGTGCGGGACTACGTGCCCGAGCCGACGGCGAAGCGTTCCCGCACGGTGGAGCA
GGCCCTGGCCGAGCTGGACGCGCTCACCCAGGCGGAGCTGATCGAAGTCGGCACGGTGGCGCGGGCGCTGGGCTACACCG
GTTCGCCCGAGACGCTCGACTCCGCGGTGTCCCCGCGGGGCTTCCGGCTGCTGGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTCGAACACTTCGGCGGGCTCCAGAAGTTGCTGGCCGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCGCGAGCGAGGAGCGTCCGCGAGGGCCTGTCCCGCCTGGCCGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.954

92.513

0.425