Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSEFU_RS01610 Genome accession   NC_015556
Coordinates   356609..357016 (+) Length   135 a.a.
NCBI ID   WP_013789447.1    Uniprot ID   -
Organism   Pseudomonas fulva 12-X     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 351609..362016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSEFU_RS01580 (Psefu_0314) - 351791..352798 (-) 1008 WP_013789441.1 aspartate carbamoyltransferase catalytic subunit -
  PSEFU_RS01585 (Psefu_0315) pyrR 352795..353316 (-) 522 WP_013789442.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSEFU_RS01590 (Psefu_0316) ruvX 353338..353781 (-) 444 WP_013789443.1 Holliday junction resolvase RuvX -
  PSEFU_RS01595 (Psefu_0317) - 353781..354350 (-) 570 WP_013789444.1 YqgE/AlgH family protein -
  PSEFU_RS01600 (Psefu_0318) - 354420..355316 (-) 897 WP_013789445.1 energy transducer TonB -
  PSEFU_RS01605 (Psefu_0319) gshB 355419..356381 (-) 963 WP_013789446.1 glutathione synthase -
  PSEFU_RS01610 (Psefu_0320) pilG 356609..357016 (+) 408 WP_013789447.1 twitching motility response regulator PilG Regulator
  PSEFU_RS01615 (Psefu_0321) pilH 357066..357431 (+) 366 WP_013789448.1 twitching motility response regulator PilH -
  PSEFU_RS01620 (Psefu_0322) - 357475..358014 (+) 540 WP_013789449.1 chemotaxis protein CheW -
  PSEFU_RS01625 (Psefu_0323) - 358097..360145 (+) 2049 WP_013789450.1 methyl-accepting chemotaxis protein -
  PSEFU_RS01630 (Psefu_0324) - 360214..361062 (+) 849 WP_013789451.1 protein-glutamate O-methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14799.15 Da        Isoelectric Point: 6.7128

>NTDB_id=40758 PSEFU_RS01610 WP_013789447.1 356609..357016(+) (pilG) [Pseudomonas fulva 12-X]
MEQHSEGLRVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPEFSPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=40758 PSEFU_RS01610 WP_013789447.1 356609..357016(+) (pilG) [Pseudomonas fulva 12-X]
ATGGAACAGCATTCGGAAGGCTTGAGGGTGATGGTGATCGACGACTCGAAGACGATTCGTCGTACAGCGGAAACCCTGCT
GAAAAAGGTGGGCTGTGATGTGATCACCGCAGTGGACGGTTTCGACGCCCTGGCGAAGATTGCCGACACCCACCCGAGCA
TCATCTTCGTCGACATCATGATGCCGCGTCTGGATGGCTATCAGACCTGCGCGTTGATCAAGAACAACAGTGCCTTCAAA
TCCACCCCCGTTATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCTGATCAATA
CCTGACCAAGCCATTCAGCAAGGAAGAGCTGCTCGGCGCGATCAAGGCCCACGTCCCGGAGTTCTCTCCGGTCGAACAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

42.063

93.333

0.393

Multiple sequence alignment