Detailed information NTG0407569

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MS10858_RS18955
• Genome accession: NZ_CP058897
• Coordinates: 3851660..3852643 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS10858
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3846660..3857643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS10858_RS18930 (MS10858_3696)	bcsF	3846821..3847012 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
MS10858_RS18935 (MS10858_3697)	bcsG	3847009..3848688 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
MS10858_RS18940 (MS10858_3698)	ldrD	3848775..3848882 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS10858_RS18945 (MS10858_3699)	yhjV	3849358..3850629 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
MS10858_RS18950 (MS10858_3700)	dppF	3850659..3851663 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MS10858_RS18955 (MS10858_3701)	amiE	3851660..3852643 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
MS10858_RS18960 (MS10858_3702)	dppC	3852654..3853556 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MS10858_RS18965 (MS10858_3703)	dppB	3853566..3854585 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
MS10858_RS18970 (MS10858_3704)	dppA	3854892..3856499 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=407569 MS10858_RS18955 WP_001540025.1 3851660..3852643(-) (amiE) [Escherichia coli strain MS10858]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=407569 MS10858_RS18955 WP_001540025.1 3851660..3852643(-) (amiE) [Escherichia coli strain MS10858]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404