Detailed information NTG0407263

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SSU10_RS09955
• Genome accession: NZ_CP058742
• Coordinates: 2028998..2030092 (+)
• Length: 364 a.a.
• NCBI ID: WP_012028050.1
• Uniprot ID: A0A0H3N2H6
• Organism: Streptococcus suis strain 10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2023998..2035092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU10_RS09930 (SSU10_01998)	pgsA	2024517..2025056 (-)	540	WP_012028045.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SSU10_RS09935 (SSU10_01999)	rodZ	2025066..2025923 (-)	858	WP_012028600.1	cytoskeleton protein RodZ	-
SSU10_RS09940 (SSU10_02000)	yfmH	2026005..2027288 (-)	1284	WP_012775413.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SSU10_RS09945 (SSU10_02001)	yfmF	2027285..2028538 (-)	1254	WP_012028048.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SSU10_RS09950 (SSU10_02002)	yaaA	2028612..2028995 (+)	384	WP_012028049.1	S4 domain-containing protein YaaA	-
SSU10_RS09955 (SSU10_02003)	recF	2028998..2030092 (+)	1095	WP_012028050.1	DNA replication/repair protein RecF	Machinery gene
SSU10_RS09960 (SSU10_02004)	guaB	2030364..2031845 (-)	1482	WP_012028051.1	IMP dehydrogenase	-
SSU10_RS09965 (SSU10_02005)	trpS	2032077..2033102 (-)	1026	WP_012775414.1	tryptophan--tRNA ligase	-
SSU10_RS09970 (SSU10_02006)	-	2033457..2034329 (+)	873	WP_012775460.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42188.24 Da
• Isoelectric Point: 6.9173

>NTDB_id=407263 SSU10_RS09955 WP_012028050.1 2028998..2030092(+) (recF) [Streptococcus suis strain 10]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=407263 SSU10_RS09955 WP_012028050.1 2028998..2030092(+) (recF) [Streptococcus suis strain 10]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGACGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAGACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAACTAGAAAAGTCTCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGCTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTATTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A0H3N2H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442