Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | GPX90_RS09940 | Genome accession | NZ_CP046752 |
| Coordinates | 1042828..1043424 (+) | Length | 198 a.a. |
| NCBI ID | WP_005297642.1 | Uniprot ID | A0A2T3QMJ2 |
| Organism | Photobacterium damselae strain 9046-81 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1037828..1048424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPX90_RS09915 | panC | 1038532..1039422 (+) | 891 | WP_158135317.1 | pantoate--beta-alanine ligase | - |
| GPX90_RS09920 | - | 1039537..1040307 (-) | 771 | WP_065171758.1 | ABC transporter permease | - |
| GPX90_RS09925 | - | 1040304..1041227 (-) | 924 | WP_158135319.1 | ABC transporter ATP-binding protein | - |
| GPX90_RS09930 | can | 1041326..1041997 (+) | 672 | WP_005297646.1 | carbonate dehydratase | - |
| GPX90_RS09935 | hpt | 1042072..1042608 (-) | 537 | WP_005297644.1 | hypoxanthine phosphoribosyltransferase | - |
| GPX90_RS09940 | opaR | 1042828..1043424 (+) | 597 | WP_005297642.1 | TetR/AcrR family transcriptional regulator | Regulator |
| GPX90_RS09945 | - | 1043498..1044535 (-) | 1038 | WP_036764789.1 | ABC transporter ATP-binding protein | - |
| GPX90_RS09950 | - | 1044538..1046163 (-) | 1626 | WP_158135321.1 | iron ABC transporter permease | - |
| GPX90_RS09955 | - | 1046319..1047332 (-) | 1014 | WP_005297636.1 | Fe(3+) ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22812.08 Da Isoelectric Point: 7.1177
>NTDB_id=407144 GPX90_RS09940 WP_005297642.1 1042828..1043424(+) (opaR) [Photobacterium damselae strain 9046-81]
MDMVIKRTRTRLSPEKRREQLLNSALDVFARRGIGRGGHADIAEMANVSVATVFNYFPTREDLVEQVLIHVESRFNKLLT
HSLNDEMPTAKAKLTNLTDCLIKAVIEQHDWLKVWFEWSTSVRDDIWPLFIKTNKNNLQKLTSVFEQGLTAGEFSRSQSA
SDLAHMFHGTCYVLYLQTHLTLDPEIMQRQADSYLQSL
MDMVIKRTRTRLSPEKRREQLLNSALDVFARRGIGRGGHADIAEMANVSVATVFNYFPTREDLVEQVLIHVESRFNKLLT
HSLNDEMPTAKAKLTNLTDCLIKAVIEQHDWLKVWFEWSTSVRDDIWPLFIKTNKNNLQKLTSVFEQGLTAGEFSRSQSA
SDLAHMFHGTCYVLYLQTHLTLDPEIMQRQADSYLQSL
Nucleotide
Download Length: 597 bp
>NTDB_id=407144 GPX90_RS09940 WP_005297642.1 1042828..1043424(+) (opaR) [Photobacterium damselae strain 9046-81]
ATGGACATGGTGATTAAGCGTACTCGTACTCGCTTATCTCCAGAAAAACGTCGAGAGCAGCTACTCAATAGCGCACTAGA
TGTTTTTGCTCGTCGTGGTATTGGCCGAGGGGGCCACGCAGATATCGCGGAAATGGCAAATGTCTCTGTTGCGACCGTTT
TCAATTATTTTCCAACTCGCGAAGATTTAGTAGAACAGGTATTAATTCACGTTGAATCTCGTTTCAATAAACTACTGACA
CACTCTCTCAACGATGAAATGCCAACAGCAAAAGCCAAACTGACTAACCTTACCGATTGCTTAATTAAAGCTGTTATAGA
GCAGCACGATTGGCTAAAAGTCTGGTTTGAATGGAGTACATCAGTACGTGATGATATTTGGCCACTGTTTATTAAAACCA
ATAAAAATAACTTACAAAAGTTAACTTCGGTTTTTGAACAGGGATTAACGGCTGGAGAATTTAGCCGCTCTCAATCTGCA
TCAGATTTAGCGCATATGTTTCACGGTACCTGTTATGTGCTGTACTTACAAACGCACCTAACCTTAGACCCTGAAATCAT
GCAGCGACAAGCTGATAGCTATTTACAGAGCCTGTAA
ATGGACATGGTGATTAAGCGTACTCGTACTCGCTTATCTCCAGAAAAACGTCGAGAGCAGCTACTCAATAGCGCACTAGA
TGTTTTTGCTCGTCGTGGTATTGGCCGAGGGGGCCACGCAGATATCGCGGAAATGGCAAATGTCTCTGTTGCGACCGTTT
TCAATTATTTTCCAACTCGCGAAGATTTAGTAGAACAGGTATTAATTCACGTTGAATCTCGTTTCAATAAACTACTGACA
CACTCTCTCAACGATGAAATGCCAACAGCAAAAGCCAAACTGACTAACCTTACCGATTGCTTAATTAAAGCTGTTATAGA
GCAGCACGATTGGCTAAAAGTCTGGTTTGAATGGAGTACATCAGTACGTGATGATATTTGGCCACTGTTTATTAAAACCA
ATAAAAATAACTTACAAAAGTTAACTTCGGTTTTTGAACAGGGATTAACGGCTGGAGAATTTAGCCGCTCTCAATCTGCA
TCAGATTTAGCGCATATGTTTCACGGTACCTGTTATGTGCTGTACTTACAAACGCACCTAACCTTAGACCCTGAAATCAT
GCAGCGACAAGCTGATAGCTATTTACAGAGCCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
48.485 |
100 |
0.485 |
| hapR | Vibrio cholerae C6706 |
48.241 |
100 |
0.485 |
| hapR | Vibrio cholerae strain A1552 |
48.241 |
100 |
0.485 |