Detailed information NTG0407116

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SSU1300283_RS05080
• Genome accession: NZ_CP058741
• Coordinates: 1050882..1051952 (+)
• Length: 356 a.a.
• NCBI ID: WP_014636926.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 13-00283-02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1045882..1056952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU1300283_RS05055 (SSU1300283_01024)	-	1046603..1046935 (+)	333	WP_002935001.1	putative DNA-binding protein	-
SSU1300283_RS05060 (SSU1300283_01025)	ffh	1046948..1048522 (+)	1575	WP_002935002.1	signal recognition particle protein	-
SSU1300283_RS05065 (SSU1300283_01026)	-	1048716..1049384 (+)	669	WP_002935003.1	SatD family protein	-
SSU1300283_RS05070 (SSU1300283_01027)	-	1049388..1050128 (+)	741	WP_002935004.1	DUF3307 domain-containing protein	-
SSU1300283_RS05075 (SSU1300283_01028)	-	1050194..1050715 (+)	522	WP_002935005.1	AAA family ATPase	-
SSU1300283_RS05080 (SSU1300283_01029)	xerS	1050882..1051952 (+)	1071	WP_014636926.1	tyrosine recombinase XerS	Machinery gene
SSU1300283_RS05085 (SSU1300283_01030)	-	1052022..1053532 (-)	1511	Protein_987	phosphomannomutase/phosphoglucomutase	-
SSU1300283_RS05090 (SSU1300283_01031)	-	1053608..1054549 (-)	942	WP_002935009.1	sensor histidine kinase	-
SSU1300283_RS05095 (SSU1300283_01032)	braR	1054546..1055211 (-)	666	WP_009909826.1	response regulator transcription factor	Regulator
SSU1300283_RS05100 (SSU1300283_01033)	-	1055250..1055456 (-)	207	WP_370287028.1	type II toxin-antitoxin system RelE/ParE family toxin	-
SSU1300283_RS05105 (SSU1300283_01034)	relB	1055497..1055736 (-)	240	WP_002935014.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41531.64 Da
• Isoelectric Point: 9.0445

>NTDB_id=407116 SSU1300283_RS05080 WP_014636926.1 1050882..1051952(+) (xerS) [Streptococcus suis strain 13-00283-02]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSNRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=407116 SSU1300283_RS05080 WP_014636926.1 1050882..1051952(+) (xerS) [Streptococcus suis strain 13-00283-02]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCTGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAACCGTGCCCT
CTCCTCTTTCCAGAAAAATAAGGAGCGAGATTTGGCGATTCTGGCACTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCATACCTTGGCAACTCGCCTATACGACGCCACA
AAGTCGCAAGTTCTGGTCAGTCATCAGCTGGGCCACGCCAATACTCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831