Detailed information NTG0406946

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: GPW86_RS04830
• Genome accession: NZ_CP046741
• Coordinates: 928474..931047 (-)
• Length: 857 a.a.
• NCBI ID: WP_001026310.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain 3523-03
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 923474..936047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPW86_RS04815	-	924214..925902 (-)	1689	WP_123011767.1	ABC transporter ATP-binding protein	-
GPW86_RS04820	-	925895..927547 (-)	1653	WP_000926949.1	ABC transporter ATP-binding protein	-
GPW86_RS04825	-	927817..928482 (+)	666	WP_000268201.1	flagellar brake protein	-
GPW86_RS04830	luxQ	928474..931047 (-)	2574	WP_001026310.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
GPW86_RS04835	luxP	931065..932159 (-)	1095	WP_095462373.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GPW86_RS04840	traF	932371..933531 (-)	1161	WP_114736304.1	conjugal transfer protein TraF	-
GPW86_RS04845	-	933633..933938 (-)	306	WP_095489792.1	GIY-YIG nuclease family protein	-
GPW86_RS04850	-	933938..934588 (-)	651	WP_001025632.1	YceH family protein	-
GPW86_RS04855	-	934630..934827 (-)	198	WP_001246071.1	hypothetical protein	-
GPW86_RS04860	-	935015..935335 (+)	321	WP_001089529.1	DUF496 family protein	-
GPW86_RS04870	-	935748..935999 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 97046.06 Da
• Isoelectric Point: 6.2402

>NTDB_id=406946 GPW86_RS04830 WP_001026310.1 928474..931047(-) (luxQ) [Vibrio cholerae strain 3523-03]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NISLINALVSRDSSRLDAFFSSVDELELSNAPDLRFISSHDNILWDDGSASFYGIAQQELKKLIRKVAISGNWHLVQTSG
DGKPVHLLMRRSSLIETGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLTVDTTPLVSTLKGNEPYSLDYVVHSGK
DVMRDSFIVGQTFLEVENVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALLSMIGVSIASRWWLQKRIQREIETLMNYTHK
LMELDTKIQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTIINAAQGNNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCHEKGLELVVNSNITTATIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVERPDAPQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKYHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=406946 GPW86_RS04830 WP_001026310.1 928474..931047(-) (luxQ) [Vibrio cholerae strain 3523-03]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCATTTATCACCCATGCTGTCGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGCTTGATGGCTCAAGAAGGGCAACGCACCTCAG
TTCAAACCTCAAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAAGACAGCACAGCCAAA
AATATCAGTTTAATCAATGCACTTGTCAGCCGAGATTCGAGTCGGTTGGATGCGTTTTTTTCCAGTGTCGATGAACTTGA
ACTCTCTAATGCGCCAGATCTGCGTTTTATCTCCAGTCACGACAACATCCTTTGGGATGATGGCAGCGCCTCCTTTTACG
GCATTGCCCAACAAGAGCTGAAGAAGCTTATCCGTAAAGTGGCGATCAGTGGCAATTGGCATTTGGTTCAAACGTCTGGC
GATGGTAAACCCGTGCATTTGTTAATGCGCCGCTCATCACTGATTGAAACAGGAACTGGGCAGGTGGTTGGGTACCTGTA
TGTGGGAATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTTCTGA
CCGTAGACACCACACCGCTGGTCTCCACCTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGTGGAAAA
GATGTCATGAGGGACAGCTTTATTGTTGGCCAAACCTTCTTAGAAGTAGAAAATGTACCGACCTATCTGTGCGTCTACTC
GATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGCTGAGTATGATTG
GTGTTTCCATAGCATCACGCTGGTGGTTACAAAAACGTATTCAGCGAGAAATCGAAACCCTAATGAATTACACCCATAAA
TTGATGGAGCTGGACACCAAGATCCAGTTTGCTGGTTCTAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAATCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTGCCGACCATCATTAATGCGGCACAGGGCAATAATCCGAGTGACGTCACAACCGA
AGTAGATGGTCGTGTGTACCGCTGGAACCTTTCGCCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAAGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAACAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCAGCACGGGTCAGA
GCCGAGTTTTTGGCCAAAATGAGTCACGAATTGCGCACGCCGCTCAATGGTGTACTCGGCGTTTCCCAACTGCTAAAACG
GACCCCACTCAATGACGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCGGTGTTGAATG
ACATCTTGGATTTCTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGCTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTCATGAAAAAGGTTTGGAACTGGTGGTGAATTCCAATATCACCACCGCTAC
CATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGCGATCCGTTAGCTCAGTTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATACGCGAACAAGATTTAACGGTGATTTTTGAACCCTTCATGCAGGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGTGGTTTAGGCTTAACGATTGTGCACAGTTTAGTGGAAATGCTCAGTGGCCAACTGCACGTCAGCTCCGAGTATGGCA
TCGGTACACGTTTTGAAATTCAGTTACCGATTGAGCTGGTAGAAAGACCGGATGCTCCGCAGCAGTTGTTACCGGCTCCT
GACCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAACGCCTTTATTGCTCAAGC
ATTCTGTCGTAAGTATGGCTTAGATGTGAGTTGGGTAACCGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGATT
ATGACTTAGTGCTGATGGATAACCAGTTACCCTATCTGGATGGCGTTGAGACCACGCGCACCATCAAAAAGGTGCTGCAT
CTTCCGGTGGTGGTGTATGCCTGTACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTATTAGTGAAGCCGCTCAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAATATCATCATGGCCAAAAAAACG
CTGGCTTAAATTGA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	97.083	100	0.971