Detailed information
Bioinformatically predicted
Overview
| Name | hapR | Type | Regulator |
| Locus tag | GPW74_RS12070 | Genome accession | NZ_CP046737 |
| Coordinates | 2623947..2624558 (-) | Length | 203 a.a. |
| NCBI ID | WP_000340100.1 | Uniprot ID | Q4F6W7 |
| Organism | Vibrio cholerae strain 2015V-1126 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
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Genomic Context
Location: 2618947..2629558
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPW74_RS12045 | - | 2619475..2620044 (-) | 570 | WP_000836325.1 | BON domain-containing protein | - |
| GPW74_RS12050 | - | 2620047..2620637 (-) | 591 | WP_000887295.1 | phosphoheptose isomerase | - |
| GPW74_RS12055 | - | 2620641..2620964 (-) | 324 | WP_000718567.1 | YraN family protein | - |
| GPW74_RS12060 | - | 2620996..2622801 (-) | 1806 | WP_001015477.1 | penicillin-binding protein activator | - |
| GPW74_RS12065 | rsmI | 2622871..2623737 (+) | 867 | WP_000131547.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GPW74_RS12070 | hapR | 2623947..2624558 (-) | 612 | WP_000340100.1 | quorum-sensing master transcriptional regulator HapR | Regulator |
| GPW74_RS12075 | hpt | 2624854..2625387 (+) | 534 | WP_000683351.1 | hypoxanthine phosphoribosyltransferase | - |
| GPW74_RS12080 | can | 2625462..2626130 (-) | 669 | WP_001114117.1 | carbonate dehydratase | - |
| GPW74_RS12085 | - | 2626278..2627924 (+) | 1647 | WP_046122227.1 | SulP family inorganic anion transporter | - |
| GPW74_RS12090 | - | 2628304..2629221 (+) | 918 | WP_111673736.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 203 a.a. Molecular weight: 23720.44 Da Isoelectric Point: 6.6356
>NTDB_id=406883 GPW74_RS12070 WP_000340100.1 2623947..2624558(-) (hapR) [Vibrio cholerae strain 2015V-1126]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNFVVRQYSNFL
TDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDV
DNMASLFHGIFYSIFLQVNRLGEQEAVYKLVDSYLNMLCIYKN
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNFVVRQYSNFL
TDHIDLDLDVKTNLQTLCKEMVKLAMTDCHWLKVWFEWSASTRDEVWPLFVSTNRTNQLLIRNMFMKAMERGELCEKHDV
DNMASLFHGIFYSIFLQVNRLGEQEAVYKLVDSYLNMLCIYKN
Nucleotide
Download Length: 612 bp
>NTDB_id=406883 GPW74_RS12070 WP_000340100.1 2623947..2624558(-) (hapR) [Vibrio cholerae strain 2015V-1126]
ATGGACGCATCAATCGAAAAACGCCCTCGAACTCGGCTATCGCCTCAAAAACGCAAACTACAACTGATGGAAATCGCGTT
GGAAGTGTTTGCTAAACGCGGCATTGGTCGTGGTGGTCACGCAGATATTGCCGAGATTGCGCAAGTCTCCGTTGCAACAG
TGTTCAACTACTTCCCAACTCGTGAAGACTTGGTTGACGATGTGCTGAATTTTGTGGTTCGTCAGTACTCCAATTTTTTG
ACCGATCACATCGATCTTGATTTGGATGTGAAAACCAACCTACAAACTCTGTGCAAAGAGATGGTGAAATTGGCGATGAC
CGATTGTCACTGGCTCAAAGTCTGGTTTGAGTGGAGTGCTTCAACCCGTGACGAAGTTTGGCCACTGTTTGTTTCCACCA
ACCGAACTAACCAACTGCTGATCAGAAACATGTTTATGAAAGCGATGGAACGTGGCGAATTGTGTGAGAAACACGATGTC
GATAACATGGCCAGCCTGTTCCACGGCATCTTCTACTCCATCTTCTTACAAGTGAACCGTTTAGGTGAACAAGAAGCAGT
GTATAAGTTGGTCGATAGCTACCTCAATATGCTGTGTATCTATAAGAACTAG
ATGGACGCATCAATCGAAAAACGCCCTCGAACTCGGCTATCGCCTCAAAAACGCAAACTACAACTGATGGAAATCGCGTT
GGAAGTGTTTGCTAAACGCGGCATTGGTCGTGGTGGTCACGCAGATATTGCCGAGATTGCGCAAGTCTCCGTTGCAACAG
TGTTCAACTACTTCCCAACTCGTGAAGACTTGGTTGACGATGTGCTGAATTTTGTGGTTCGTCAGTACTCCAATTTTTTG
ACCGATCACATCGATCTTGATTTGGATGTGAAAACCAACCTACAAACTCTGTGCAAAGAGATGGTGAAATTGGCGATGAC
CGATTGTCACTGGCTCAAAGTCTGGTTTGAGTGGAGTGCTTCAACCCGTGACGAAGTTTGGCCACTGTTTGTTTCCACCA
ACCGAACTAACCAACTGCTGATCAGAAACATGTTTATGAAAGCGATGGAACGTGGCGAATTGTGTGAGAAACACGATGTC
GATAACATGGCCAGCCTGTTCCACGGCATCTTCTACTCCATCTTCTTACAAGTGAACCGTTTAGGTGAACAAGAAGCAGT
GTATAAGTTGGTCGATAGCTACCTCAATATGCTGTGTATCTATAAGAACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hapR | Vibrio cholerae C6706 |
99.507 |
100 |
0.995 |
| hapR | Vibrio cholerae strain A1552 |
99.507 |
100 |
0.995 |
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
72.727 |
97.537 |
0.709 |