Detailed information NTG0406846

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: GPW66_RS17230
• Genome accession: NZ_CP046736
• Coordinates: 2692088..2693383 (-)
• Length: 431 a.a.
• NCBI ID: WP_158106604.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain 3528-08
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 2687088..2698383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPW66_RS17195	moaE	2687801..2688262 (-)	462	WP_000350082.1	molybdopterin synthase catalytic subunit MoaE	-
GPW66_RS17200	moaD	2688264..2688509 (-)	246	WP_000598588.1	molybdopterin synthase sulfur carrier subunit	-
GPW66_RS17205	moaC	2688506..2688985 (-)	480	WP_000080908.1	cyclic pyranopterin monophosphate synthase MoaC	-
GPW66_RS17210	moaB	2688996..2689508 (-)	513	WP_095490393.1	molybdenum cofactor biosynthesis protein B	-
GPW66_RS17215	moaA	2689568..2690557 (-)	990	WP_095490402.1	GTP 3',8-cyclase MoaA	-
GPW66_RS17220	-	2690864..2691754 (+)	891	WP_000061070.1	YvcK family protein	-
GPW66_RS17225	luxU	2691743..2692084 (-)	342	WP_001209531.1	quorum-sensing phosphorelay protein LuxU	-
GPW66_RS17230	luxO	2692088..2693383 (-)	1296	WP_158106604.1	sigma-54 dependent transcriptional regulator	Regulator
GPW66_RS17235	uvrB	2693814..2695844 (-)	2031	WP_032472885.1	excinuclease ABC subunit UvrB	-
GPW66_RS17245	-	2696612..2697976 (-)	1365	Protein_2368	IS4-like element ISVa18 family transposase	-

Sequence

Protein

• Length: 431 a.a.
• Molecular weight: 48193.16 Da
• Isoelectric Point: 5.0645

>NTDB_id=406846 GPW66_RS17230 WP_158106604.1 2692088..2693383(-) (luxO) [Vibrio cholerae strain 3528-08]
MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLYAVKEKSPDVPIVFMTAHGSI
DTAVEAMRHGAQDFLIKPCEADRLYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPF
IAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSV
DVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYE
WPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMYAPINRALPLAHENKVSVHEIFPLWMTEKQAIEQAIEACDGNIP
RAATYLDVSPSTIYRKLQTWNEKVKEKEKER

Nucleotide

• Length: 1296 bp

>NTDB_id=406846 GPW66_RS17230 WP_158106604.1 2692088..2693383(-) (luxO) [Vibrio cholerae strain 3528-08]
ATGGTAGAAGACACGGCGTCGGTGGCGGCGCTGTATCGTTCTTACCTCACACCGCTGGATATTGATATCAATATCGTGGG
TACCGGACGCGATGCCATCGAGAGTATTGGCCGTCGCGAGCCTGACTTAATCCTGCTGGATTTACGTTTGCCAGATATGA
CGGGGATGGACGTACTCTATGCAGTGAAAGAGAAATCACCGGATGTGCCTATCGTGTTTATGACCGCTCATGGTTCGATT
GATACGGCGGTTGAAGCAATGCGTCATGGTGCGCAAGACTTTTTGATCAAGCCGTGTGAAGCGGACCGACTCTATCAAGG
CTTTATTGGTAGCAGTCAAACCATGCAGGCGGTGTACCGCACCATTGACTCTGCGGCGAGCAGCAAAGCCAGTATTTTTA
TTACTGGCGAAAGTGGTACCGGTAAAGAAGTGTGCGCGGAAGCGATTCATGCCGCGAGCAAGCGTGGAGATAAGCCATTT
ATCGCCATCAACTGTGCGGCCATTCCGAAAGATCTGATTGAAAGTGAGTTGTTTGGTCACGTCAAAGGGGCTTTTACTGG
GGCGGCGACTGAGCGTCAAGGCGCGGCAGAAGCGGCTGATGGGGGAACCCTCTTTTTGGATGAATTGTGCGAAATGGATC
TGGATCTGCAGACCAAACTGCTGCGCTTTATTCAGACAGGGACATTCCAAAAAGTCGGCTCTTCTAAAATGAAAAGCGTG
GATGTGCGTTTTGTGTGTGCAACGAACCGCGATCCGTGGAAGGAAGTGCAAGAAGGACGTTTTCGTGAAGACCTGTACTA
CCGCTTGTATGTGATCCCGCTGCATTTACCGCCATTGCGCGCGCGCGGTGATGATGTGATCGAGATTGCTTACTCACTGC
TTGGCTTTATGTCCAAGGAAGAGGGCAAAGATTTTGTCCGTTTGTCGGCTGAAGTGGTGGAGCGTTTTCGTCAATACGAG
TGGCCGGGCAACGTGCGTCAATTGCAAAACGTTTTGCGCAACGTGGTCGTGCTCAATGAAGGTCGTGAAATCACCTTAGA
TATGCTGCCTCCTCCTCTTAATCAAATGTACGCGCCGATCAATCGGGCTTTACCGCTTGCGCATGAGAATAAAGTATCCG
TGCATGAGATTTTTCCGCTATGGATGACCGAAAAACAAGCCATTGAACAAGCCATAGAAGCGTGTGATGGTAACATTCCC
CGCGCCGCGACCTATCTGGATGTCAGTCCATCAACCATCTATCGCAAGCTGCAAACTTGGAATGAAAAAGTGAAAGAAAA
AGAGAAGGAACGGTAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (109-274)

• Bacterial regulatory protein, Fis family (HTH_8) (380-418)

• Response regulator receiver domain (Response_reg) (2-106)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	94.505	100	0.998
pilR	Pseudomonas aeruginosa PAK	37.104	100	0.381