Detailed information NTG0040681

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SSU12_RS04225
• Genome accession: NC_017619
• Coordinates: 855404..856474 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis SS12
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 850404..861474

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU12_RS04205 (SSU12_0820)	-	851519..852187 (+)	669	WP_011922395.1	SatD family protein	-
SSU12_RS04210 (SSU12_0821)	-	852191..852931 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
SSU12_RS04215 (SSU12_0822)	-	852996..853433 (+)	438	WP_011922397.1	AAA family ATPase	-
SSU12_RS10630 (SSU12_0823)	-	854144..855045 (+)	902	Protein_777	Abi family protein	-
SSU12_RS04225 (SSU12_0825)	xerS	855404..856474 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
SSU12_RS04230 (SSU12_0826)	-	856544..858052 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
SSU12_RS04235 (SSU12_0827)	-	858128..859069 (-)	942	WP_012775102.1	sensor histidine kinase	-
SSU12_RS04240 (SSU12_0828)	braR	859066..859731 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
SSU12_RS04245 (SSU12_0829)	-	859770..860027 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE/ParE family toxin	-
SSU12_RS04250 (SSU12_0830)	relB	860011..860262 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=40681 SSU12_RS04225 WP_012775101.1 855404..856474(+) (xerS) [Streptococcus suis SS12]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=40681 SSU12_RS04225 WP_012775101.1 855404..856474(+) (xerS) [Streptococcus suis SS12]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831