Detailed information NTG0406663

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GO999_RS14750
• Genome accession: NZ_CP046674
• Coordinates: 3204556..3205701 (+)
• Length: 381 a.a.
• NCBI ID: WP_211906342.1
• Uniprot ID: -
• Organism: Ralstonia nicotianae strain RS
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3199556..3210701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO999_RS14725 (GO999_14725)	-	3199912..3200160 (-)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-
GO999_RS14730 (GO999_14730)	coaD	3200211..3200717 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
GO999_RS14735 (GO999_14735)	rsmD	3200913..3201560 (-)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GO999_RS14740 (GO999_14740)	-	3201641..3202984 (-)	1344	WP_011000351.1	pitrilysin family protein	-
GO999_RS14745 (GO999_14745)	-	3202984..3204495 (-)	1512	WP_211906341.1	pitrilysin family protein	-
GO999_RS14750 (GO999_14750)	pilA	3204556..3205701 (+)	1146	WP_211906342.1	signal recognition particle-docking protein FtsY	Machinery gene
GO999_RS14755 (GO999_14755)	-	3205698..3206336 (-)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
GO999_RS14760 (GO999_14760)	maiA	3206333..3206983 (-)	651	WP_019717483.1	maleylacetoacetate isomerase	-
GO999_RS14765 (GO999_14765)	-	3206987..3207688 (-)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
GO999_RS14770 (GO999_14770)	-	3207836..3208462 (+)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
GO999_RS14775 (GO999_14775)	-	3208737..3209999 (+)	1263	WP_019717482.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40341.60 Da
• Isoelectric Point: 5.8101

>NTDB_id=406663 GO999_RS14750 WP_211906342.1 3204556..3205701(+) (pilA) [Ralstonia nicotianae strain RS]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPVATPVPTPAPAPVAAPVAVPDTPAAPAALDMQADDIETVPTPPVV
EQARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALR
DLLIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVV
AQESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKA
FDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1146 bp

>NTDB_id=406663 GO999_RS14750 WP_211906342.1 3204556..3205701(+) (pilA) [Ralstonia nicotianae strain RS]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCGGTTGCCACCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGCCCCGGTCGCCG
TGCCGGATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTG
GAGCAGGCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGT
CGGCGTGAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCG
AGTACCTGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGC
GACCTGCTCATCGAGCTGCTGCATCCGCTAGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGC
GGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGC
TGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTG
GCGCAGGAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCAT
GGCCGACACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAG
CGATGGCGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCC
TTCGACGATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAAGGCGGCATCCTGGCCGCCAT
CGCGCGGCAGCGGCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCG
AATTCGCCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (181-381)

• SRP54-type protein, helical bundle domain (SRP54_N) (100-161)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.404	100	0.572