Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   HYQ63_RS23925 Genome accession   NZ_CP058693
Coordinates   5587570..5588628 (-) Length   352 a.a.
NCBI ID   WP_179935796.1    Uniprot ID   -
Organism   Streptomyces sp. Rer75     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5582570..5593628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HYQ63_RS23900 (HYQ63_23900) cseB 5583181..5583891 (-) 711 WP_179935792.1 two-component system response regulator CseB -
  HYQ63_RS23905 (HYQ63_23905) - 5583901..5584632 (-) 732 WP_179935793.1 hypothetical protein -
  HYQ63_RS23910 (HYQ63_23910) - 5584620..5585237 (-) 618 WP_179935794.1 SigE family RNA polymerase sigma factor -
  HYQ63_RS23915 (HYQ63_23915) - 5585491..5586411 (-) 921 WP_257232045.1 A/G-specific adenine glycosylase -
  HYQ63_RS23920 (HYQ63_23920) - 5586650..5587501 (+) 852 WP_179935795.1 hypothetical protein -
  HYQ63_RS23925 (HYQ63_23925) disA 5587570..5588628 (-) 1059 WP_179935796.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  HYQ63_RS23930 (HYQ63_23930) radA/sms 5588899..5590320 (-) 1422 WP_179935797.1 DNA repair protein RadA Machinery gene
  HYQ63_RS23935 (HYQ63_23935) - 5590503..5592215 (+) 1713 WP_179935798.1 sigma-70 family RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38193.95 Da        Isoelectric Point: 5.0869

>NTDB_id=406536 HYQ63_RS23925 WP_179935796.1 5587570..5588628(-) (disA) [Streptomyces sp. Rer75]
MRATLSAVAPGTALRDGLERVLRGNTGGLIVLGTDKTVESLCTGGFVIDVEFTATRLRELCKLDGALVLDKDISKIVRAG
VQLVPDAAIATEETGTRHRTAQRVSIQTGFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIAGVEPERELVVRDYVPEPTAKRT
RTVADALAELDRLTHTELLELPIVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGAIIERLVEHFGGLQKLLAASVDD
LQMVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=406536 HYQ63_RS23925 WP_179935796.1 5587570..5588628(-) (disA) [Streptomyces sp. Rer75]
ATGCGTGCCACTCTGAGCGCTGTCGCGCCGGGCACGGCGCTGCGCGACGGCCTTGAGCGCGTCCTCCGTGGAAACACGGG
CGGGCTCATCGTGCTCGGCACCGACAAGACCGTGGAGTCGCTGTGTACCGGCGGCTTCGTCATCGACGTCGAGTTCACCG
CCACCCGGCTGCGCGAACTGTGCAAGCTGGACGGGGCGCTGGTACTCGACAAGGACATCAGCAAGATCGTGCGGGCGGGG
GTGCAGCTCGTCCCGGACGCGGCGATCGCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGCAGCGCGTCTCGATCCA
GACCGGGTTCCCGGTCGTGTCCGTCAGCCAGTCCATGCGGCTGATCGCGCTGTACGTGGACGGGCAGCGGCGGGTCCTGG
AGGATTCCGCGGCCATCCTGTCCCGCGCCAACCAGGCGCTGGCCACCCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTC
GCGGGCACCCTCTCCGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCAGCGCGGTCGCGCAGCGGCTGGAGAT
GGTGCGGCGCATCGCCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGCCGGCTGCTGTCGCTCCAGCTGG
ACGAGCTGATCGCGGGCGTCGAGCCGGAGCGGGAGCTGGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCACC
CGCACCGTCGCCGACGCGCTCGCCGAGCTGGACCGGCTCACCCACACCGAGCTGCTCGAACTCCCCATCGTGGCCCGCGC
CCTGGGGTACACGGGCTCCCCCGAGACCCTGGACTCGGCGGTCTCCCCGCGCGGCTTCCGGCTGCTGGCCAAGGTGCCGA
GGCTGCCGGGGGCGATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTACAGAAGCTGCTGGCCGCGAGCGTGGACGAT
CTCCAGATGGTCGACGGCGTGGGCGAGGCCCGGGCCCGCTCGGTCCGCGAGGGCCTGTCGCGGCTGGCGGAGTCGTCGAT
CCTGGAGCGGTACGTGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(16-129)

DisA bacterial checkpoint controller linker region (DisA-linker)

(133-275)

Helix-hairpin-helix motif (HHH_2)

(302-337)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.571

99.432

0.463