Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | GO593_RS15515 | Genome accession | NZ_CP046654 |
| Coordinates | 3238553..3238933 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ATCC 19606 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3233553..3243933
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO593_RS15485 (GO593_15485) | kdsB | 3234456..3235217 (+) | 762 | WP_000680698.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| GO593_RS15490 (GO593_15490) | - | 3235229..3236209 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| GO593_RS15495 (GO593_15495) | - | 3236221..3236562 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| GO593_RS15500 (GO593_15500) | - | 3236580..3237353 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| GO593_RS15505 (GO593_15505) | - | 3237391..3237999 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| GO593_RS15510 (GO593_15510) | - | 3238009..3238563 (+) | 555 | WP_000841370.1 | type II secretion system protein | - |
| GO593_RS15515 (GO593_15515) | xcpV | 3238553..3238933 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| GO593_RS15520 (GO593_15520) | xcpW | 3238933..3239634 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| GO593_RS15525 (GO593_15525) | gspK | 3239634..3240593 (+) | 960 | WP_000301461.1 | type II secretion system minor pseudopilin GspK | - |
| GO593_RS15530 (GO593_15530) | - | 3240823..3241419 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| GO593_RS15535 (GO593_15535) | ung | 3241470..3242183 (+) | 714 | WP_001177525.1 | uracil-DNA glycosylase | - |
| GO593_RS15540 (GO593_15540) | - | 3242180..3243304 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| GO593_RS15545 (GO593_15545) | tadA | 3243311..3243814 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=406501 GO593_RS15515 WP_000836911.1 3238553..3238933(+) (xcpV) [Acinetobacter baumannii strain ATCC 19606]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=406501 GO593_RS15515 WP_000836911.1 3238553..3238933(+) (xcpV) [Acinetobacter baumannii strain ATCC 19606]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |