Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   GPA07_RS05225 Genome accession   NZ_CP046653
Coordinates   1018155..1020476 (+) Length   773 a.a.
NCBI ID   WP_008357179.1    Uniprot ID   A0AAC9IJH3
Organism   Bacillus sp. ms-22     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1013155..1025476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPA07_RS05200 (GPA07_05200) - 1014607..1015833 (+) 1227 WP_008357188.1 HDOD domain-containing protein -
  GPA07_RS05205 (GPA07_05205) - 1015868..1016221 (-) 354 WP_034738645.1 hypothetical protein -
  GPA07_RS05210 (GPA07_05210) degQ 1016727..1016867 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  GPA07_RS05215 (GPA07_05215) - 1017020..1017934 (+) 915 WP_008357184.1 polyprenyl synthetase family protein -
  GPA07_RS05220 (GPA07_05220) comX 1017931..1018101 (+) 171 WP_008357181.1 competence pheromone ComX -
  GPA07_RS05225 (GPA07_05225) comP 1018155..1020476 (+) 2322 WP_008357179.1 ATP-binding protein Regulator
  GPA07_RS05230 (GPA07_05230) comA 1020557..1021198 (+) 642 WP_008357178.1 response regulator transcription factor Regulator
  GPA07_RS05235 (GPA07_05235) - 1021222..1021611 (+) 390 WP_008357176.1 hotdog fold thioesterase -
  GPA07_RS05240 (GPA07_05240) mnhG 1021706..1022080 (-) 375 WP_071168673.1 monovalent cation/H(+) antiporter subunit G -
  GPA07_RS05245 (GPA07_05245) - 1022064..1022345 (-) 282 WP_157292138.1 Na(+)/H(+) antiporter subunit F1 -
  GPA07_RS05250 (GPA07_05250) - 1022345..1022824 (-) 480 WP_008357170.1 Na+/H+ antiporter subunit E -
  GPA07_RS05255 (GPA07_05255) - 1022831..1024309 (-) 1479 WP_157292139.1 Na+/H+ antiporter subunit D -
  GPA07_RS05260 (GPA07_05260) - 1024302..1024643 (-) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  GPA07_RS05265 (GPA07_05265) - 1024643..1025074 (-) 432 WP_008357166.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 773 a.a.        Molecular weight: 89915.53 Da        Isoelectric Point: 6.8449

>NTDB_id=406415 GPA07_RS05225 WP_008357179.1 1018155..1020476(+) (comP) [Bacillus sp. ms-22]
MKITYTKLSAFLVFLSFLFVIYVSYIYVFDIFNGARVAENKNGQAEVVKVEYLSLAYTSGLEEGDIILKINGEPANNKDH
LINGELRNVQRIDIQRGNQMITLKNKTLIGQESLFVYIIPLILYSICLFCIFFIIRINKEVQRKSAFLLVLFLLTICIGY
LSAGTSGIGDRFSHYVITFCLSSVFIFYIHFIYQYFKEFDLHITTRKTIYILYSLPITNLVIELFVPIDSVIARYMPSLN
LLFFFASIIMSFKVIINGMQKYKETEQGSVLKFFVMINIIAFCPFIFLFAIPYVLFRIYVVDPFFLTSFVLLIPFSLVYQ
FMTNKLYNMDFLISRLKYYGFIAITPTILVVVTFYILQKPEDLKYTLKLTFITYTLMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGEIVEIDEIDESIEESQLWKDYVDQFQDILGEV
GKIIGLDKGFMMKIGERGGHSFVICCLSNLKTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQRESNPAWL
KKIMFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFHNEQCTTSIENSLISWNEQMSKVIQTTRETCHELRPQLL
YDLGLVKAISKLVSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHY
EDDGVGFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2322 bp        

>NTDB_id=406415 GPA07_RS05225 WP_008357179.1 1018155..1020476(+) (comP) [Bacillus sp. ms-22]
ATGAAGATAACTTATACGAAACTATCTGCTTTTTTGGTTTTTCTGTCTTTTTTATTTGTGATCTATGTTTCATATATTTA
TGTATTTGATATTTTTAATGGAGCACGTGTTGCGGAGAACAAGAATGGTCAAGCAGAAGTTGTCAAAGTCGAATATCTTT
CTTTAGCCTACACATCAGGATTAGAAGAAGGAGATATTATACTTAAAATCAATGGAGAACCTGCTAACAATAAAGATCAT
TTGATCAATGGTGAGCTTAGGAATGTGCAAAGAATTGATATTCAAAGAGGCAACCAAATGATCACCCTAAAAAATAAGAC
ATTGATTGGTCAAGAAAGTTTATTTGTCTATATAATTCCTCTCATCCTGTATTCAATATGTTTATTTTGTATCTTCTTTA
TCATTCGTATTAACAAAGAGGTCCAACGAAAATCAGCATTTCTTTTAGTTTTATTTTTATTAACGATTTGTATCGGATAT
CTTAGTGCAGGTACTTCAGGTATTGGTGATAGATTTAGCCATTATGTCATCACATTTTGTTTATCAAGTGTATTTATCTT
TTATATTCATTTCATTTATCAATATTTTAAAGAGTTTGACCTGCATATAACGACTCGAAAAACAATTTATATTTTATATA
GTCTTCCTATAACTAATCTAGTAATAGAGCTGTTTGTTCCAATTGATTCGGTGATAGCCAGATACATGCCGAGTTTAAAT
CTTTTATTCTTTTTTGCTTCTATTATCATGTCATTCAAAGTCATTATTAATGGAATGCAGAAATATAAAGAGACAGAGCA
GGGGTCTGTTTTAAAGTTTTTTGTCATGATTAATATCATAGCATTTTGTCCGTTTATATTTTTATTTGCAATTCCATATG
TTTTGTTTCGTATTTATGTTGTAGATCCCTTTTTCTTAACTTCTTTTGTATTGCTCATTCCTTTTTCACTCGTGTATCAA
TTCATGACGAACAAACTTTACAATATGGATTTCTTGATTAGTAGACTTAAATACTATGGATTTATTGCCATTACACCGAC
CATTTTAGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTAAAGTACACACTGAAGCTCACATTCATCACAT
ATACACTCATGTTGGCTGTTTTCTATTTTAAAGAAATTTTAGATTTCCGTTTTCGTTTGAAACGTTTTTCAGAGAAGCAT
AATTATCAGGATAGTGTATTTAAATTTACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTACTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTCGTTGTGAATAAAGCCTTTGTGCTAGAGGTGAAGGCTGATGGAGAAATTGTTGAAATTG
ATGAAATTGATGAATCAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGATCAATTTCAAGATATTTTAGGTGAAGTT
GGTAAAATCATCGGACTGGATAAAGGATTCATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTT
ATCCAATTTAAAGACACCGAAGCTGACCCGCGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTT
TAGAAAATGTCGTCAAGATTGAAGAATTGATGGAGCATCTTGAAGATTTGAAACAGCGTGAATCCAATCCTGCTTGGCTG
AAAAAGATCATGTTTGCGATGGAAGAGAAGCAGCGCTCAGATTTAGCGAGGGATCTCCATGATTCTGTGCTGCAGGATTT
GATTTCGCTGAAAAGACAGTCTGAAATGTTTTTAACCAATTTTCATAATGAACAATGCACAACGTCTATTGAAAATTCGC
TTATCTCATGGAATGAACAAATGTCTAAGGTGATTCAAACCACAAGAGAAACATGCCATGAACTTCGGCCACAACTCCTT
TATGATTTAGGGTTAGTGAAGGCGATTTCGAAGCTGGTTTCTCAAATCCAAGAGGAAGCACCATTTCATATTAGGCTGAA
TACGACCCGCTTTGATAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATTGTGCAGGAGCTGTTAT
CCAATGCGTTGAAGCATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTAT
GAGGACGATGGAGTCGGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGACTCTCAGGTATAAGGGAGCG
AGTCAAAGCGTTAAATGGGAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.586

100

0.489


Multiple sequence alignment