Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | GPA07_RS00485 | Genome accession | NZ_CP046653 |
| Coordinates | 78976..81411 (-) | Length | 811 a.a. |
| NCBI ID | WP_008356478.1 | Uniprot ID | - |
| Organism | Bacillus sp. ms-22 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 73976..86411
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPA07_RS00460 (GPA07_00460) | ispF | 73983..74459 (-) | 477 | WP_007496273.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| GPA07_RS00465 (GPA07_00465) | ispD | 74463..75152 (-) | 690 | WP_008356486.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| GPA07_RS00470 (GPA07_00470) | - | 75166..76266 (-) | 1101 | WP_157291864.1 | PIN/TRAM domain-containing protein | - |
| GPA07_RS00475 (GPA07_00475) | disA | 76421..77500 (-) | 1080 | WP_008356482.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| GPA07_RS00480 (GPA07_00480) | radA | 77503..78882 (-) | 1380 | WP_071168236.1 | DNA repair protein RadA | Machinery gene |
| GPA07_RS00485 (GPA07_00485) | clpC | 78976..81411 (-) | 2436 | WP_008356478.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| GPA07_RS00490 (GPA07_00490) | - | 81408..82499 (-) | 1092 | WP_008356475.1 | protein arginine kinase | - |
| GPA07_RS00495 (GPA07_00495) | - | 82504..83061 (-) | 558 | WP_034738425.1 | UvrB/UvrC motif-containing protein | - |
| GPA07_RS00500 (GPA07_00500) | - | 83076..83540 (-) | 465 | WP_008356472.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90023.79 Da Isoelectric Point: 6.2474
>NTDB_id=406399 GPA07_RS00485 WP_008356478.1 78976..81411(-) (clpC) [Bacillus sp. ms-22]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=406399 GPA07_RS00485 WP_008356478.1 78976..81411(-) (clpC) [Bacillus sp. ms-22]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTTGGCCATAA
GAATATTGGAACAGAGCACATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCGATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCTATGGATGAAGCAAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTTGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCAAAT
ACACCAACTTTAGATAGTCTTGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAACGTGTTATTGAGGTCTTAAGTAGAAGAACAAAGAATAACCCTGTGCTGATTGGGGAGCCTGGTGTTG
GTAAAACAGCCATTGCAGAAGGTCTGGCGCAGCAAATTATTCACAACGAAGTGCCTGAAATCCTTCGTGATAAACGAGTG
ATGACACTTGATATGGGAACCGTAGTTGCGGGAACGAAATATCGCGGGGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATCGGTGCAGGTGGAGCAGAGGGTG
CGATTGACGCGTCTAATATTCTGAAACCATCCTTGGCACGTGGTGAGCTTCAATGTATCGGGGCTACAACGTTAGATGAG
TACCGTAAATACATTGAGAAGGATGCTGCGCTTGAACGCCGATTCCAGCCAATTCAAGTCGATCAACCGTCTGTTGAAGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCGATTACAGATGAAGCCATTGAAG
CGGCGGTAAAGCTTTCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTGCGTTCTTTCACAACACCGCCGAACCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTTCGTAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGTGATACAGAGCAGCGCTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCGTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCGATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACGGAAACAGATAAGCTTCTAAATATGGAACAATTGCT
CCACTCCCGCGTCATTGGACAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCAGTGAGACGTGCCCGTGCTGGTCTAAAAG
ATCCGAAGCGTCCGATTGGCTCCTTTATTTTCTTAGGTCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGATATGTCTGAATACATGGAAAAACACTCTACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTTGGCTATGATGAGGGCGGCCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTGTTAGATGAGATTGAAAAGGCGCATCCTGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGATGGCCGTCTC
ACTGATTCTAAAGGACGTACTGTTGACTTTAGAAATACAATTTTGATCATGACTTCAAACGTTGGAGCTAGTGAATTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTTGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTAACAAAACGATTAAAAGAGCAAGACCTTTCAATCGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCTGAGGAAGGCGTAGACCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TTGAGGATCGACTTTCTGAGGAATTGCTGAAGGGCAATATTGAAAAGGGTCAACATATTGTATTAGATGTAGAAGATGGG
GAAATTGTCGTAAAAGCTACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTTGGCCATAA
GAATATTGGAACAGAGCACATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCGATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCTATGGATGAAGCAAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTTGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCAAAT
ACACCAACTTTAGATAGTCTTGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAACGTGTTATTGAGGTCTTAAGTAGAAGAACAAAGAATAACCCTGTGCTGATTGGGGAGCCTGGTGTTG
GTAAAACAGCCATTGCAGAAGGTCTGGCGCAGCAAATTATTCACAACGAAGTGCCTGAAATCCTTCGTGATAAACGAGTG
ATGACACTTGATATGGGAACCGTAGTTGCGGGAACGAAATATCGCGGGGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATCGGTGCAGGTGGAGCAGAGGGTG
CGATTGACGCGTCTAATATTCTGAAACCATCCTTGGCACGTGGTGAGCTTCAATGTATCGGGGCTACAACGTTAGATGAG
TACCGTAAATACATTGAGAAGGATGCTGCGCTTGAACGCCGATTCCAGCCAATTCAAGTCGATCAACCGTCTGTTGAAGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCGATTACAGATGAAGCCATTGAAG
CGGCGGTAAAGCTTTCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTGCGTTCTTTCACAACACCGCCGAACCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTTCGTAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGTGATACAGAGCAGCGCTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCGTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCGATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACGGAAACAGATAAGCTTCTAAATATGGAACAATTGCT
CCACTCCCGCGTCATTGGACAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCAGTGAGACGTGCCCGTGCTGGTCTAAAAG
ATCCGAAGCGTCCGATTGGCTCCTTTATTTTCTTAGGTCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGATATGTCTGAATACATGGAAAAACACTCTACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTTGGCTATGATGAGGGCGGCCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTGTTAGATGAGATTGAAAAGGCGCATCCTGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGATGGCCGTCTC
ACTGATTCTAAAGGACGTACTGTTGACTTTAGAAATACAATTTTGATCATGACTTCAAACGTTGGAGCTAGTGAATTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTTGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTAACAAAACGATTAAAAGAGCAAGACCTTTCAATCGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCTGAGGAAGGCGTAGACCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TTGAGGATCGACTTTCTGAGGAATTGCTGAAGGGCAATATTGAAAAGGGTCAACATATTGTATTAGATGTAGAAGATGGG
GAAATTGTCGTAAAAGCTACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.948 |
87.916 |
0.43 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae Rx1 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae D39 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae R6 |
52.558 |
79.531 |
0.418 |