Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GPA00_RS04945 Genome accession   NZ_CP046629
Coordinates   974494..975219 (+) Length   241 a.a.
NCBI ID   WP_157327708.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU G6     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 969494..980219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPA00_RS04915 (GPA00_04915) - 969920..971341 (+) 1422 WP_107374581.1 NCS2 family permease -
  GPA00_RS04920 (GPA00_04920) tsaE 971506..971949 (+) 444 WP_044023456.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GPA00_RS04925 (GPA00_04925) - 971942..972454 (+) 513 WP_074567228.1 GNAT family N-acetyltransferase -
  GPA00_RS04930 (GPA00_04930) brpA 972465..973628 (+) 1164 WP_157327706.1 biofilm formation/cell division transcriptional regulator BrpA -
  GPA00_RS04935 (GPA00_04935) - 973700..974014 (-) 315 WP_021141714.1 hypothetical protein -
  GPA00_RS04940 (GPA00_04940) - 974011..974430 (-) 420 WP_021141715.1 HIT family protein -
  GPA00_RS04945 (GPA00_04945) pptA 974494..975219 (+) 726 WP_157327708.1 ABC transporter ATP-binding protein Regulator
  GPA00_RS04950 (GPA00_04950) - 975222..976256 (+) 1035 WP_157327711.1 ABC transporter permease -
  GPA00_RS04955 (GPA00_04955) ccrZ 976290..977123 (+) 834 WP_157327713.1 cell cycle regulator CcrZ -
  GPA00_RS04960 (GPA00_04960) trmB 977123..977761 (+) 639 WP_021141720.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GPA00_RS04970 (GPA00_04970) - 978107..979132 (+) 1026 WP_157327720.1 sensor domain-containing diguanylate cyclase -
  GPA00_RS04975 (GPA00_04975) - 979138..980205 (+) 1068 WP_157328517.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26705.02 Da        Isoelectric Point: 4.6769

>NTDB_id=406305 GPA00_RS04945 WP_157327708.1 974494..975219(+) (pptA) [Streptococcus equinus strain CNU G6]
MLKIENLTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGLLTPYQGQITLDGLTLANNQADYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLEFEAAMARAKELLKLFRLSDKLDWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTDLLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHHGQVRAVGNLAELRETFGQEDASLNDIYIALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=406305 GPA00_RS04945 WP_157327708.1 974494..975219(+) (pptA) [Streptococcus equinus strain CNU G6]
ATGTTAAAAATTGAAAATCTTACAGGTGGATATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
TGAACTTGTTGGATTAATTGGGCTAAATGGTGCTGGAAAATCAACAACCATAAATGAAATTATTGGACTTTTGACGCCTT
ATCAAGGTCAAATTACGCTAGATGGTTTGACTTTGGCTAATAATCAAGCTGATTATCGTAAAAAAATCGGTTTTATTCCT
GAAACACCAAGTTTATATGAAGAGTTGACTTTGCGTGAGCATTTGGAAACTGTTGCAATGGCTTATGATCTTGAGTTTGA
GGCTGCTATGGCGCGTGCAAAAGAGCTGCTAAAACTTTTCCGTCTGTCTGATAAACTTGATTGGTTCCCGATTAATTTTT
CAAAAGGGATGAAGCAAAAAGTCATGATTATTTGTGCTTTCATGGTTAATCCAAGTTTATTTATCGTCGATGAACCGTTT
TTAGGATTGGATCCGTTGGCTATTTCTGATTTAACAGATTTGCTGGCGCAAGAAAAGGCTAAAGGTAAGGCGATTTTGAT
GTCGACACACGTGCTAGATGCTGCTGAAAAAATGTGTGACCGTTTTGTGATTTTGCATCATGGTCAAGTAAGAGCTGTAG
GAAATTTGGCTGAATTGCGAGAAACTTTCGGTCAGGAAGATGCCAGCTTGAATGACATTTACATAGCTTTGACTAAAGAG
GGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.498

99.17

0.788
  pptA Streptococcus thermophilus LMD-9

78.243

99.17

0.776

Multiple sequence alignment