Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   GPA00_RS02950 Genome accession   NZ_CP046629
Coordinates   603570..604352 (+) Length   260 a.a.
NCBI ID   WP_033153625.1    Uniprot ID   A0A1G9LUB8
Organism   Streptococcus equinus strain CNU G6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 598570..609352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPA00_RS02940 (GPA00_02940) rlmH 601558..602037 (-) 480 WP_004233682.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  GPA00_RS02945 (GPA00_02945) htrA 602250..603509 (+) 1260 WP_033153623.1 S1C family serine protease Regulator
  GPA00_RS02950 (GPA00_02950) spo0J 603570..604352 (+) 783 WP_033153625.1 ParB/RepB/Spo0J family partition protein Regulator
  GPA00_RS02955 (GPA00_02955) dnaA 604557..605912 (+) 1356 WP_157327492.1 chromosomal replication initiator protein DnaA -
  GPA00_RS02960 (GPA00_02960) dnaN 606070..607206 (+) 1137 WP_021143391.1 DNA polymerase III subunit beta -
  GPA00_RS02965 (GPA00_02965) - 607337..608221 (+) 885 WP_027968263.1 diacylglycerol/lipid kinase family protein -
  GPA00_RS02970 (GPA00_02970) - 608232..608426 (+) 195 WP_004233691.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 260 a.a.        Molecular weight: 29875.59 Da        Isoelectric Point: 9.9946

>NTDB_id=406287 GPA00_RS02950 WP_033153625.1 603570..604352(+) (spo0J) [Streptococcus equinus strain CNU G6]
MTETLNLINIDDISPNPYQPRLEFKQEELEELSRSIKANGLIQPIIVRKSAIFGYELIAGERRLKASKMAGLSEIPAIIK
EISNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDRNQMTHEELAQFMGKSRPYITNCLRLLNLPSAISKAVERGQLSQG
HARVLLTLKNEKEQEKWYQKVITEEISVRKLEELVKKSKPTKKSSKKNKKNIFIRHQEEELSKLLGVPVSLSLAKSGFKG
DLQLHFQSEEDFNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=406287 GPA00_RS02950 WP_033153625.1 603570..604352(+) (spo0J) [Streptococcus equinus strain CNU G6]
ATGACTGAGACACTTAACCTAATAAATATTGACGATATTTCTCCAAATCCTTACCAACCACGCTTAGAATTTAAACAAGA
AGAATTAGAAGAGCTATCTCGATCAATCAAAGCTAATGGCCTTATTCAGCCCATTATCGTTCGAAAATCTGCTATCTTTG
GATATGAGCTTATAGCAGGAGAGAGACGTCTTAAAGCTTCTAAAATGGCTGGTTTGAGCGAAATTCCAGCGATTATCAAA
GAAATTTCTAATAAAGAAAGTATGCAACTGGCTATTGTCGAAAATTTGCAACGTTCAGACCTTAATCCCATCGAGGAAGC
AAAAGCCTATCAGCAATTATTAGACAGAAATCAGATGACACACGAAGAATTGGCTCAATTCATGGGAAAATCTCGTCCTT
ACATCACCAATTGCTTACGATTATTGAATTTACCAAGTGCCATTTCTAAAGCCGTTGAGCGAGGGCAACTATCCCAAGGT
CACGCGCGCGTGCTTCTCACATTAAAAAATGAAAAAGAACAAGAGAAGTGGTACCAAAAAGTCATTACTGAAGAAATTAG
CGTCCGAAAACTGGAAGAATTAGTCAAAAAATCTAAACCCACTAAAAAATCTTCAAAAAAAAATAAAAAAAATATTTTTA
TTCGTCATCAAGAAGAAGAACTGTCAAAATTGTTAGGAGTCCCAGTTAGCTTATCCCTTGCCAAATCAGGCTTCAAGGGA
GATTTGCAATTGCATTTTCAGAGCGAAGAAGACTTTAACAGAATTATCAACAGGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1G9LUB8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.004

99.615

0.608


Multiple sequence alignment