Detailed information NTG0406256

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: GO596_RS07290
• Genome accession: NZ_CP046628
• Coordinates: 1453262..1454491 (+)
• Length: 409 a.a.
• NCBI ID: WP_024343987.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain CNU 77-23
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1448262..1459491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO596_RS07265 (GO596_07265)	-	1448852..1450126 (-)	1275	WP_157339490.1	hydroxymethylglutaryl-CoA reductase, degradative	-
GO596_RS07270 (GO596_07270)	-	1450113..1451291 (-)	1179	WP_074483567.1	hydroxymethylglutaryl-CoA synthase	-
GO596_RS07275 (GO596_07275)	-	1451622..1452461 (+)	840	WP_021142433.1	thymidylate synthase	-
GO596_RS07280 (GO596_07280)	-	1452545..1453039 (+)	495	WP_039690582.1	dihydrofolate reductase	-
GO596_RS07285 (GO596_07285)	-	1453055..1453225 (+)	171	WP_021142431.1	hypothetical protein	-
GO596_RS07290 (GO596_07290)	clpX	1453262..1454491 (+)	1230	WP_024343987.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
GO596_RS07295 (GO596_07295)	yihA	1454501..1455094 (+)	594	WP_004232043.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
GO596_RS07300 (GO596_07300)	-	1455231..1456607 (+)	1377	WP_157339491.1	amino acid permease	-
GO596_RS07305 (GO596_07305)	mmuM	1456620..1457564 (+)	945	WP_126437889.1	homocysteine S-methyltransferase	-
GO596_RS07310 (GO596_07310)	-	1457599..1458267 (-)	669	WP_029875966.1	DUF1275 family protein	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45200.64 Da
• Isoelectric Point: 4.4317

>NTDB_id=406256 GO596_RS07290 WP_024343987.1 1453262..1454491(+) (clpX) [Streptococcus equinus strain CNU 77-23]
MVGNRTNDVKVYCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLATLDEYVVGQER
AKRALAVAVYNHYKRVSFAESRDEEDVELQKSNILLIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNRKIDEDASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLTADDLVRI
LTEPRNALVKQYQTLLSYDGVELEFDEDALQAIANKAIERKTGARGLRSIIEETMMDIMFEIPSREEVTKVRITKDAVEG
TDKPILETA

Nucleotide

• Length: 1230 bp

>NTDB_id=406256 GO596_RS07290 WP_024343987.1 1453262..1454491(+) (clpX) [Streptococcus equinus strain CNU 77-23]
ATGGTTGGAAATCGAACAAATGATGTAAAAGTTTATTGCTCATTTTGTGGAAAAAGCCAAGACGAAGTAAAAAAAATTAT
TGCAGGAAATAATGTTTTTATTTGTAATGAATGTGTGGCTTTATCCCAAGAGATTATTAAAGAAGAATTAGCAGAAGAAG
TTCTTGCAGATTTGGCAGAAGTTCCAAAACCAAAAGAATTACTAGCTACCCTTGATGAATATGTTGTTGGTCAAGAACGT
GCAAAACGTGCTCTTGCAGTAGCAGTTTACAATCACTACAAGCGTGTATCTTTTGCTGAAAGTCGTGATGAAGAAGATGT
TGAATTGCAAAAATCAAACATTTTGCTTATCGGACCAACAGGGTCAGGGAAAACTTTCCTTGCTCAAACATTGGCTAAAA
GTCTTAATGTTCCATTTGCAATTGCAGATGCGACATCATTGACTGAAGCAGGATATGTCGGTGAAGACGTTGAAAATATC
CTTTTGAAACTGATTCAAGCAGCTGATTTTAATATTGAACGTGCTGAACGTGGTATTATCTACGTCGATGAAATTGATAA
AATCGCTAAAAAAGGTGAAAATGTTTCAATTACTCGTGACGTTTCAGGTGAAGGTGTTCAACAAGCTCTTCTTAAAATCA
TTGAAGGAACTGTTGCTAGCGTACCACCACAAGGTGGACGTAAACACCCTAACCAAGAAATGATTCAAATTGATACCAAG
AATATTCTTTTCATCGTTGGTGGTGCGTTTGATGGTATCGAAGATATTGTTAAACAACGTCTTGGTGAAAAAATTATTGG
TTTTGGTCAAAATAACCGTAAAATTGATGAAGATGCATCTTATATGCAAGAAATCATCTCAGAAGATATTCAAAAATTTG
GTCTTATTCCAGAGTTTATCGGACGCTTGCCTGTAGTAGCTGCGCTTGAACAATTGACTGCGGATGATTTGGTTCGTATC
TTGACTGAACCTCGCAATGCCTTGGTTAAACAATACCAAACATTGCTATCTTATGATGGTGTTGAGTTGGAATTTGATGA
AGATGCTCTTCAAGCAATTGCCAATAAAGCTATCGAACGTAAGACAGGTGCGCGTGGACTTCGTTCAATTATTGAAGAAA
CAATGATGGATATCATGTTTGAAATTCCTAGTCGCGAAGAAGTTACCAAAGTTCGCATCACTAAAGATGCTGTCGAAGGT
ACTGATAAACCTATCTTAGAAACTGCATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.22	100	0.902
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.853	98.044	0.577