Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | GO596_RS06995 | Genome accession | NZ_CP046628 |
| Coordinates | 1404767..1405207 (+) | Length | 146 a.a. |
| NCBI ID | WP_021142471.1 | Uniprot ID | A0A239R922 |
| Organism | Streptococcus equinus strain CNU 77-23 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1389550..1408787 | 1404767..1405207 | within | 0 |
Gene organization within MGE regions
Location: 1389550..1408787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO596_RS06920 (GO596_06920) | - | 1390319..1390699 (+) | 381 | WP_021142489.1 | DUF1149 family protein | - |
| GO596_RS06925 (GO596_06925) | - | 1390699..1391547 (+) | 849 | WP_157339451.1 | DegV family protein | - |
| GO596_RS06930 (GO596_06930) | dapB | 1391568..1392335 (+) | 768 | WP_004232139.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| GO596_RS06935 (GO596_06935) | - | 1392332..1393537 (+) | 1206 | WP_157339452.1 | CCA tRNA nucleotidyltransferase | - |
| GO596_RS06940 (GO596_06940) | - | 1393534..1395402 (+) | 1869 | WP_157339453.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| GO596_RS06945 (GO596_06945) | - | 1395447..1397186 (+) | 1740 | WP_027968630.1 | ABC transporter ATP-binding protein | - |
| GO596_RS06950 (GO596_06950) | - | 1397189..1398958 (+) | 1770 | WP_157339454.1 | ABC transporter ATP-binding protein | - |
| GO596_RS06955 (GO596_06955) | queC | 1399124..1399777 (+) | 654 | WP_004232125.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| GO596_RS06960 (GO596_06960) | queD | 1399777..1400223 (+) | 447 | WP_027968631.1 | 6-carboxytetrahydropterin synthase QueD | - |
| GO596_RS06965 (GO596_06965) | queE | 1400216..1400929 (+) | 714 | WP_157339455.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| GO596_RS06970 (GO596_06970) | queF | 1400944..1401435 (+) | 492 | WP_021142478.1 | preQ(1) synthase | - |
| GO596_RS06975 (GO596_06975) | - | 1401474..1401971 (-) | 498 | WP_157339456.1 | DUF308 domain-containing protein | - |
| GO596_RS06980 (GO596_06980) | gdhA | 1402201..1403550 (+) | 1350 | WP_021142476.1 | NADP-specific glutamate dehydrogenase | - |
| GO596_RS06985 (GO596_06985) | - | 1403703..1404206 (+) | 504 | WP_157339457.1 | GNAT family N-acetyltransferase | - |
| GO596_RS06990 (GO596_06990) | - | 1404209..1404619 (+) | 411 | WP_157339458.1 | peptide deformylase | - |
| GO596_RS06995 (GO596_06995) | rcrR | 1404767..1405207 (+) | 441 | WP_021142471.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| GO596_RS07000 (GO596_07000) | rcrP | 1405211..1407025 (+) | 1815 | WP_157339459.1 | ABC transporter ATP-binding protein | Regulator |
| GO596_RS07005 (GO596_07005) | rcrQ | 1407015..1408787 (+) | 1773 | WP_157339460.1 | ABC transporter ATP-binding protein | Regulator |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17068.56 Da Isoelectric Point: 7.4039
>NTDB_id=406253 GO596_RS06995 WP_021142471.1 1404767..1405207(+) (rcrR) [Streptococcus equinus strain CNU 77-23]
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVELTELGRAKTKDIDAFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE
MRDKDPFSQLRDFVNLMENRVHELGELHDVENLAGPQGFAVLYLRDNEDKEVFIKDIERKLKISKSVTSNLIKRMEKNGF
IKVVPSEVDKRYKRVELTELGRAKTKDIDAFHAAVHKQIFDGISREELEISGRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=406253 GO596_RS06995 WP_021142471.1 1404767..1405207(+) (rcrR) [Streptococcus equinus strain CNU 77-23]
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTTAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGGTTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGAGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGCCTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCGAGATAAAGATCCGTTTTCACAATTAAGAGACTTCGTTAATTTGATGGAAAACCGTGTGCACGAACTCGGTGAACT
TCATGATGTGGAGAACTTAGCTGGTCCGCAGGGGTTTGCGGTTTTATATTTGAGAGATAATGAAGATAAAGAAGTTTTCA
TTAAAGATATTGAACGTAAGCTTAAAATTTCAAAATCTGTAACCAGTAATTTGATTAAAAGAATGGAAAAGAATGGTTTT
ATAAAAGTTGTTCCATCTGAAGTAGATAAACGTTACAAGCGTGTAGAGCTTACTGAACTTGGTCGAGCTAAGACAAAAGA
TATTGATGCCTTTCACGCTGCGGTTCACAAGCAAATTTTTGATGGCATTAGTCGTGAAGAGCTAGAAATTTCTGGTCGTG
TCTTTGATCGTATTTTGAAAAATTTAGAAAACAAGGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
51.748 |
97.945 |
0.507 |