Detailed information NTG0406255

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: GO596_RS07005
• Genome accession: NZ_CP046628
• Coordinates: 1407015..1408787 (+)
• Length: 590 a.a.
• NCBI ID: WP_157339460.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain CNU 77-23
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1389550..1408787	1407015..1408787	within	0

Gene organization within MGE regions

Location: 1389550..1408787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO596_RS06920 (GO596_06920)	-	1390319..1390699 (+)	381	WP_021142489.1	DUF1149 family protein	-
GO596_RS06925 (GO596_06925)	-	1390699..1391547 (+)	849	WP_157339451.1	DegV family protein	-
GO596_RS06930 (GO596_06930)	dapB	1391568..1392335 (+)	768	WP_004232139.1	4-hydroxy-tetrahydrodipicolinate reductase	-
GO596_RS06935 (GO596_06935)	-	1392332..1393537 (+)	1206	WP_157339452.1	CCA tRNA nucleotidyltransferase	-
GO596_RS06940 (GO596_06940)	-	1393534..1395402 (+)	1869	WP_157339453.1	ABC-F family ATP-binding cassette domain-containing protein	-
GO596_RS06945 (GO596_06945)	-	1395447..1397186 (+)	1740	WP_027968630.1	ABC transporter ATP-binding protein	-
GO596_RS06950 (GO596_06950)	-	1397189..1398958 (+)	1770	WP_157339454.1	ABC transporter ATP-binding protein	-
GO596_RS06955 (GO596_06955)	queC	1399124..1399777 (+)	654	WP_004232125.1	7-cyano-7-deazaguanine synthase QueC	-
GO596_RS06960 (GO596_06960)	queD	1399777..1400223 (+)	447	WP_027968631.1	6-carboxytetrahydropterin synthase QueD	-
GO596_RS06965 (GO596_06965)	queE	1400216..1400929 (+)	714	WP_157339455.1	7-carboxy-7-deazaguanine synthase QueE	-
GO596_RS06970 (GO596_06970)	queF	1400944..1401435 (+)	492	WP_021142478.1	preQ(1) synthase	-
GO596_RS06975 (GO596_06975)	-	1401474..1401971 (-)	498	WP_157339456.1	DUF308 domain-containing protein	-
GO596_RS06980 (GO596_06980)	gdhA	1402201..1403550 (+)	1350	WP_021142476.1	NADP-specific glutamate dehydrogenase	-
GO596_RS06985 (GO596_06985)	-	1403703..1404206 (+)	504	WP_157339457.1	GNAT family N-acetyltransferase	-
GO596_RS06990 (GO596_06990)	-	1404209..1404619 (+)	411	WP_157339458.1	peptide deformylase	-
GO596_RS06995 (GO596_06995)	rcrR	1404767..1405207 (+)	441	WP_021142471.1	MarR family winged helix-turn-helix transcriptional regulator	Regulator
GO596_RS07000 (GO596_07000)	rcrP	1405211..1407025 (+)	1815	WP_157339459.1	ABC transporter ATP-binding protein	Regulator
GO596_RS07005 (GO596_07005)	rcrQ	1407015..1408787 (+)	1773	WP_157339460.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 590 a.a.
• Molecular weight: 65328.31 Da
• Isoelectric Point: 4.9717

>NTDB_id=406255 GO596_RS07005 WP_157339460.1 1407015..1408787(+) (rcrQ) [Streptococcus equinus strain CNU 77-23]
MENKKKASFYSRMKPYIKGFQFPFILAVIGAIISATITVIGPDKLKEITNTIMDGLTPTKMGTIPGVDLDKVGEIAMTLA
ILYGVSAVVGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLAQSLNQSLGTLVTSVVL
LFGSIFMMFHSNVSMALTAIGSVFIGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSEAFKK
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDDSHKERQLTAVKGEVAFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQISIDGIDTRNMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKNAPLLILDEATSSVDTRTEELIQRAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGNHDELMTEGGFYADLYNSQFEVA

Nucleotide

• Length: 1773 bp

>NTDB_id=406255 GO596_RS07005 WP_157339460.1 1407015..1408787(+) (rcrQ) [Streptococcus equinus strain CNU 77-23]
ATGGAAAATAAGAAAAAAGCATCTTTCTATAGCAGAATGAAGCCATATATCAAAGGTTTCCAATTTCCATTCATCCTTGC
GGTGATTGGAGCGATTATTTCTGCGACTATCACGGTTATTGGACCTGATAAATTAAAAGAGATTACAAATACGATTATGG
ACGGATTGACACCTACGAAAATGGGAACAATTCCAGGTGTTGATTTGGACAAAGTCGGAGAAATTGCAATGACACTTGCT
ATTTTGTATGGTGTCTCAGCTGTGGTTGGTTATATTCAGAACTTTACAGTTGCCACAATCGTTCAACGTTTTTCACAACG
ATTACGTGCAGCTATTCAAGTTAAAATTGACCGTGTTCCACTAAATTATTTTGATAGTCATTCACAAGGTGATACCCTTT
CTCGTGTGACGAACGATGTTGACTTACTTGCTCAATCACTTAACCAAAGTTTGGGAACATTAGTGACTTCTGTTGTGCTT
TTGTTTGGTTCAATTTTCATGATGTTCCACTCAAATGTCAGCATGGCTTTGACAGCTATCGGATCAGTTTTCATTGGTTT
CCTTTTGGTTGTCGTCATTATGGGCTCATCACAACCATTGTTTAAACGTCAACAAAACAACTTGGCAGCAGTCAACGGTT
ATGTCGAAGAAATTTATTCTGGACACAATGTGGTAACAAGTTACAACGCGTCTGAAGAAACAAGTGAAGCCTTTAAGAAA
CTAAATACAAACCTTTATAAATCAATGTGGCAATCGCAATTCTTGTCTGGTATTATGATGCCGCTGATGATTTTCATTGG
TAACTTTGGTTACGTTATGGTCTGTGTTGTTGGTGCCGTCAAAGTTATTAACGGTGACATTACAATGGGAGACGTGGTTG
CCTTTATGACTTATGTTCGTATCTTTTCACAACCATTGTCACAAATTGCGCAAGCCTTCACACAAATGCAATCAGCAACT
GCTGCAATGAGCCGCGTCTTTGAGTTCCTTGAAGAAGAAGAAATGGAAGATGATTCTCACAAAGAACGTCAATTGACAGC
TGTTAAAGGTGAGGTTGCCTTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACGATTATCCATGATTTCTCAGCTG
TTGCTAAACCAGGACAAAAAGTGGCTATCGTTGGACCAACAGGTGCTGGTAAAACAACCATTGTTAATTTGCTTATGAAA
TTCTATGAAATCGATAAAGGTCAAATCTCTATCGATGGTATTGATACTCGTAACATGTCACGAGAAGAAGTTCACGATCA
ATTCTCAATGGTGCTTCAAGATACTTGGTTGTTTGAAGGTACAATCAAAGAAAACTTGATTTACAACCAAGAAAACATTA
CTGATGAACAAGTGGTTGCCGCAGCTAAAGCAGTCGGTGTTCACCACTTTATCATGACGCTTCCTGATGGATATGATACT
TATCTTGATGACTCAGTAACCCTTTCAATTGGTCAAAAACAACTTTTGACAATTGCGCGTGCGCTCTTAAAAAATGCTCC
GCTTCTTATCTTGGATGAGGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAGAGCTATGGATAAATTGA
TGGAAGGTCGCACATCATTTGTAATTGCTCACCGTCTATCAACTATTAAAAACGCTGATCTTATCCTTGTTATGAAAGAT
GGTAACATCATCGAACAAGGAAATCATGATGAGTTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAACTCACAGTT
TGAAGTAGCATAA

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (24-306)

• ABC transporter (ABC_tran) (370-516)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	72.804	100	0.731