Detailed information NTG0040618

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: UMN179_RS06230
• Genome accession: NC_015460
• Coordinates: 1336088..1337284 (-)
• Length: 398 a.a.
• NCBI ID: WP_013746030.1
• Uniprot ID: F4H9U4
• Organism: Gallibacterium anatis UMN179
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1331088..1342284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UMN179_RS06210 (UMN179_01227)	-	1331498..1333678 (+)	2181	WP_013746028.1	type I secretion system permease/ATPase	-
UMN179_RS06215 (UMN179_01228)	-	1333688..1335028 (+)	1341	WP_013746029.1	HlyD family efflux transporter periplasmic adaptor subunit	-
UMN179_RS12860 (UMN179_01229)	-	1335252..1335904 (+)	653	Protein_1212	IS1595 family transposase	-
UMN179_RS06230 (UMN179_01231)	dprA	1336088..1337284 (-)	1197	WP_013746030.1	DNA-processing protein DprA	Machinery gene
UMN179_RS06235 (UMN179_01233)	def	1337485..1338000 (+)	516	WP_013746032.1	peptide deformylase	-
UMN179_RS06240 (UMN179_01234)	-	1338381..1338986 (+)	606	WP_237699494.1	RNA-guided endonuclease InsQ/TnpB family protein	-
UMN179_RS13785	-	1338979..1339104 (+)	126	WP_237699495.1	transposase	-
UMN179_RS06245 (UMN179_01236)	-	1339278..1340030 (+)	753	WP_013746033.1	DeoR/GlpR family DNA-binding transcription regulator	-
UMN179_RS06250 (UMN179_01237)	fucI	1340250..1342007 (+)	1758	WP_013746034.1	L-fucose isomerase	-

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 43479.92 Da
• Isoelectric Point: 6.5702

>NTDB_id=40618 UMN179_RS06230 WP_013746030.1 1336088..1337284(-) (dprA) [Gallibacterium anatis UMN179]
MQTVTTLLRLALLPQFGAIKIQQLLEQISLDTLLSYDRQTLSQIGWNTAQIQAWFSPPQAIIDTVLNWQQQADNHILHYF
DHSYPFLLKQTRSAPPLLFVKGNIDVLSSPQIAMVGSRYCSPYGEHYAQTIAGELVHSGITINSGLALGIDGICHRAALD
NHGKTIAVLGSGLNELYPARHKKLAQQILENNGALLSELFPDTPPIAENFPRRNRIISGLSFGTIVIEASQKSGSLITAR
LALEQNREVFAVPGALDNPLSQGCHHLIKQGAWLIENAQDVLEILTPQISSLMPFTPAMEIQTPTGNRATAQSTIAISPQ
AKSGYTPPTINKKAVIKLDIPPQHQALMQQLNSATAISPDELSTALNRPIDQILTDLLELEILGAVQQIQGGYIKNIV

Nucleotide

• Length: 1197 bp

>NTDB_id=40618 UMN179_RS06230 WP_013746030.1 1336088..1337284(-) (dprA) [Gallibacterium anatis UMN179]
ATGCAAACAGTAACCACACTTTTACGTTTAGCACTGCTGCCACAATTCGGTGCTATCAAAATTCAACAACTGCTTGAACA
AATCTCACTAGATACGCTGCTCAGCTACGATCGACAAACACTCAGCCAAATCGGTTGGAACACTGCGCAAATTCAGGCTT
GGTTTTCACCGCCGCAAGCGATTATCGACACCGTTCTGAATTGGCAACAACAGGCAGACAACCATATTCTGCACTATTTT
GATCACAGTTACCCATTTTTGTTGAAACAAACTCGCTCCGCACCACCATTGCTGTTTGTTAAAGGTAACATTGATGTACT
TTCTTCTCCACAAATCGCTATGGTAGGTAGTCGCTATTGTTCACCTTATGGCGAACATTACGCCCAAACTATTGCCGGCG
AATTGGTACATAGCGGAATTACTATCAACAGCGGTTTAGCCTTAGGCATTGACGGCATTTGTCATCGTGCCGCTTTGGAT
AATCACGGTAAAACCATTGCCGTTTTGGGCAGTGGATTGAATGAACTCTATCCGGCTCGCCACAAAAAATTGGCACAACA
GATTCTAGAAAACAACGGTGCATTGCTGTCGGAACTGTTCCCCGACACACCTCCCATTGCAGAAAATTTTCCACGCCGAA
ACCGAATTATCAGCGGTCTCTCGTTCGGCACCATCGTCATCGAAGCCTCACAAAAAAGCGGTTCATTAATTACTGCACGT
CTGGCATTGGAACAAAATCGCGAAGTGTTCGCCGTTCCAGGTGCATTGGACAATCCATTGAGTCAAGGTTGCCATCACTT
AATCAAACAAGGGGCGTGGTTAATTGAAAATGCACAGGATGTATTAGAGATTCTAACACCGCAAATTTCATCATTAATGC
CGTTTACACCAGCAATGGAGATACAAACGCCAACCGGCAATCGTGCTACTGCACAAAGCACGATCGCAATATCACCACAA
GCAAAATCCGGTTACACGCCGCCGACCATCAACAAAAAAGCGGTGATCAAACTTGATATTCCGCCACAACATCAAGCATT
AATGCAACAATTAAACAGTGCAACCGCGATTTCACCGGATGAACTTTCGACAGCATTAAATCGCCCTATCGATCAAATTC
TTACCGATCTATTGGAACTGGAAATTCTCGGTGCAGTGCAACAAATCCAAGGAGGTTATATTAAAAATATCGTCTAA

Domains

Predicted by InterProScan.

• DNA recombination-mediator protein A (DNA_processg_A) (70-276)

• DprA winged helix domain (DprA_WH) (342-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	49.492	98.995	0.49
dprA	Haemophilus influenzae Rd KW20	51.087	92.462	0.472
dprA	Vibrio campbellii strain DS40M4	43.59	97.99	0.427