Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   GO995_RS02715 Genome accession   NZ_CP046624
Coordinates   502050..503135 (+) Length   361 a.a.
NCBI ID   WP_074563228.1    Uniprot ID   A0AAE8L2Q8
Organism   Streptococcus ruminicola strain CNU_G3     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 497050..508135
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO995_RS02690 (GO995_02690) - 497388..498596 (+) 1209 WP_157628783.1 MFS transporter -
  GO995_RS02695 (GO995_02695) asnA 498941..499933 (+) 993 WP_074563225.1 aspartate--ammonia ligase -
  GO995_RS02700 (GO995_02700) - 500035..500820 (-) 786 WP_420853566.1 hypothetical protein -
  GO995_RS02705 (GO995_02705) rsmD 501004..501543 (+) 540 WP_039697336.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  GO995_RS02710 (GO995_02710) coaD 501575..502072 (+) 498 WP_157628784.1 pantetheine-phosphate adenylyltransferase -
  GO995_RS02715 (GO995_02715) sepM 502050..503135 (+) 1086 WP_074563228.1 SepM family pheromone-processing serine protease Regulator
  GO995_RS02720 (GO995_02720) - 503266..503514 (+) 249 WP_074601322.1 DUF3923 family protein -
  GO995_RS02725 (GO995_02725) - 503617..504945 (+) 1329 WP_157628785.1 bifunctional metallophosphatase/5'-nucleotidase -
  GO995_RS02730 (GO995_02730) - 504975..505535 (+) 561 WP_039697320.1 YutD family protein -
  GO995_RS02735 (GO995_02735) rlmN 505556..506656 (+) 1101 WP_074626091.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  GO995_RS02740 (GO995_02740) - 506667..507173 (+) 507 WP_157628786.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39225.43 Da        Isoelectric Point: 5.0954

>NTDB_id=406159 GO995_RS02715 WP_074563228.1 502050..503135(+) (sepM) [Streptococcus ruminicola strain CNU_G3]
MTILNAFKGILKKLGRILYRFKWWILGVVGTVFLIFSLFYPLDYYVEMPGGAYDVRSVLTVNNKTDKDEGSYNFVAVTVS
QATLAQLVYAWLTPHTEISTAAATTGGYSNEDYMRINQYYMETSQNTATYQALTLAGKDVKLDYQGVYVLNVTKNSTFKG
LLHLADTVTGVNGKTFKSSQELMAYVADLDLGSKVTVQEISNGKTKEVSGKIIELPNGKNGIGIGLVDHTKVSSDVDVTF
DTSGVGGPSAGLMFTLDIYDQVNNEDLRKGRKIAGTGTIESDGSVGDIGGAGLKVVSAAKSGADIFFVPNNPVDKETLKK
DPDAKTNYEEAKEAAKDLDTDMKIVPVKNVQEAIDYLRSTN

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=406159 GO995_RS02715 WP_074563228.1 502050..503135(+) (sepM) [Streptococcus ruminicola strain CNU_G3]
ATGACAATCTTAAACGCATTTAAAGGGATTTTGAAAAAGTTAGGTCGTATTTTATACCGCTTTAAATGGTGGATACTAGG
AGTAGTGGGAACTGTATTTCTCATCTTTAGTTTATTTTATCCCCTCGACTATTATGTTGAAATGCCTGGGGGTGCTTATG
ATGTTCGTAGTGTTTTAACCGTTAATAACAAAACAGATAAAGACGAAGGCTCCTATAACTTTGTAGCGGTGACAGTGAGC
CAAGCGACGCTTGCTCAGTTGGTTTATGCTTGGTTAACACCGCATACGGAGATTTCAACGGCTGCCGCAACAACAGGTGG
CTACAGTAATGAAGATTACATGCGTATTAATCAATACTACATGGAAACTTCACAAAATACAGCGACCTACCAAGCTTTAA
CCCTAGCAGGGAAAGACGTTAAGCTTGATTATCAAGGCGTCTATGTCCTAAATGTAACCAAAAATTCAACCTTTAAAGGA
CTTTTACATCTAGCTGATACGGTTACTGGTGTAAATGGAAAAACGTTCAAGAGTTCACAAGAATTGATGGCTTATGTAGC
AGACTTGGATCTTGGCTCTAAAGTCACTGTTCAAGAAATTTCAAATGGTAAAACTAAAGAGGTTTCTGGTAAAATCATTG
AATTGCCAAATGGTAAAAATGGTATCGGTATTGGTCTGGTCGATCATACCAAGGTGTCATCTGATGTCGACGTGACTTTT
GATACCAGTGGTGTTGGTGGACCTAGTGCAGGCTTGATGTTCACCCTTGATATTTATGATCAAGTTAATAACGAAGATCT
TCGTAAAGGTCGTAAAATTGCTGGTACTGGTACCATTGAATCAGATGGTTCTGTTGGCGATATCGGTGGAGCTGGCTTAA
AAGTCGTCTCAGCTGCCAAATCTGGTGCAGATATTTTCTTTGTTCCAAATAATCCAGTCGATAAAGAAACATTGAAAAAA
GATCCTGATGCTAAGACAAATTACGAAGAAGCCAAAGAAGCTGCTAAAGACCTTGATACAGACATGAAAATTGTCCCTGT
CAAGAATGTCCAAGAAGCGATTGATTACCTAAGAAGTACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.142

93.906

0.64


Multiple sequence alignment