Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GO600_RS00390 | Genome accession | NZ_CP046617 |
| Coordinates | 65274..65582 (-) | Length | 102 a.a. |
| NCBI ID | WP_028493658.1 | Uniprot ID | A0A430RD44 |
| Organism | Thermus antranikianii strain JCM 19900 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 60274..70582
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO600_RS00370 (GO600_00370) | rsmG | 60960..61688 (+) | 729 | WP_028493654.1 | 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG | - |
| GO600_RS00375 (GO600_00375) | soj | 61682..62434 (+) | 753 | WP_028493655.1 | chromosome-partitioning ATPase Soj | - |
| GO600_RS00380 (GO600_00380) | - | 62418..63230 (+) | 813 | WP_028493656.1 | ParB/RepB/Spo0J family partition protein | - |
| GO600_RS00385 (GO600_00385) | comA/comEC | 63218..65287 (-) | 2070 | WP_038050738.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| GO600_RS00390 (GO600_00390) | comEA | 65274..65582 (-) | 309 | WP_028493658.1 | ComEA family DNA-binding protein | Machinery gene |
| GO600_RS00395 (GO600_00395) | - | 65555..66205 (-) | 651 | WP_028493659.1 | YcxB family protein | - |
| GO600_RS00400 (GO600_00400) | - | 66229..66879 (+) | 651 | WP_028493660.1 | glycerophosphodiester phosphodiesterase | - |
| GO600_RS00405 (GO600_00405) | - | 66890..67420 (+) | 531 | WP_028493661.1 | inorganic diphosphatase | - |
| GO600_RS00410 (GO600_00410) | - | 67506..68003 (+) | 498 | WP_028493662.1 | hypothetical protein | - |
| GO600_RS00415 (GO600_00415) | rsmI | 68005..68817 (+) | 813 | WP_028493663.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GO600_RS00420 (GO600_00420) | pfkA | 68814..69782 (+) | 969 | WP_028493664.1 | 6-phosphofructokinase | - |
| GO600_RS00425 (GO600_00425) | - | 69810..70265 (-) | 456 | WP_028493665.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 102 a.a. Molecular weight: 11308.46 Da Isoelectric Point: 8.5051
>NTDB_id=406053 GO600_RS00390 WP_028493658.1 65274..65582(-) (comEA) [Thermus antranikianii strain JCM 19900]
MVFLYLLAVALLGLFNLWPKLAPKPQPVRVEVLAEASFEPPAPEPISLNQATLEELMTLPGVGPVLAQRIVEGRPYTRVE
DLLRVKGIGPATLERLRPYVRP
MVFLYLLAVALLGLFNLWPKLAPKPQPVRVEVLAEASFEPPAPEPISLNQATLEELMTLPGVGPVLAQRIVEGRPYTRVE
DLLRVKGIGPATLERLRPYVRP
Nucleotide
Download Length: 309 bp
>NTDB_id=406053 GO600_RS00390 WP_028493658.1 65274..65582(-) (comEA) [Thermus antranikianii strain JCM 19900]
GTGGTTTTCCTCTACCTCCTCGCGGTAGCCCTCCTGGGTCTTTTCAACCTTTGGCCCAAGCTGGCCCCCAAACCCCAACC
GGTGCGGGTGGAAGTCCTGGCGGAGGCCAGCTTCGAGCCCCCAGCCCCCGAACCCATCAGCTTGAACCAAGCCACCCTCG
AGGAACTCATGACCCTCCCTGGGGTCGGCCCCGTGCTGGCCCAGAGGATCGTGGAGGGAAGACCCTACACCCGGGTGGAG
GACCTCCTGAGGGTCAAGGGCATCGGCCCCGCCACCCTGGAACGGCTCAGGCCCTATGTCCGGCCCTAG
GTGGTTTTCCTCTACCTCCTCGCGGTAGCCCTCCTGGGTCTTTTCAACCTTTGGCCCAAGCTGGCCCCCAAACCCCAACC
GGTGCGGGTGGAAGTCCTGGCGGAGGCCAGCTTCGAGCCCCCAGCCCCCGAACCCATCAGCTTGAACCAAGCCACCCTCG
AGGAACTCATGACCCTCCCTGGGGTCGGCCCCGTGCTGGCCCAGAGGATCGTGGAGGGAAGACCCTACACCCGGGTGGAG
GACCTCCTGAGGGTCAAGGGCATCGGCCCCGCCACCCTGGAACGGCTCAGGCCCTATGTCCGGCCCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Thermus thermophilus HB27 |
75.49 |
100 |
0.755 |
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
40.741 |
100 |
0.431 |