Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GOY17_RS04335 Genome accession   NZ_CP046603
Coordinates   954261..954659 (+) Length   132 a.a.
NCBI ID   WP_115843698.1    Uniprot ID   -
Organism   Lysobacter soli strain XL170     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 949261..959659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOY17_RS04320 (GOY17_04320) tsaB 951095..951808 (+) 714 WP_157029468.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  GOY17_RS04325 (GOY17_04325) - 951999..952874 (-) 876 WP_157029469.1 energy transducer TonB -
  GOY17_RS04330 (GOY17_04330) gshB 952930..953880 (-) 951 WP_115843700.1 glutathione synthase -
  GOY17_RS04335 (GOY17_04335) pilG 954261..954659 (+) 399 WP_115843698.1 twitching motility response regulator PilG Regulator
  GOY17_RS04340 (GOY17_04340) - 954678..955043 (+) 366 WP_115843696.1 response regulator -
  GOY17_RS04345 (GOY17_04345) - 955059..955658 (+) 600 WP_198173910.1 chemotaxis protein CheW -
  GOY17_RS04350 (GOY17_04350) - 955655..957676 (+) 2022 WP_115843692.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14710.06 Da        Isoelectric Point: 7.1360

>NTDB_id=405992 GOY17_RS04335 WP_115843698.1 954261..954659(+) (pilG) [Lysobacter soli strain XL170]
MLDEVRNGSLGGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NHLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRTHVNA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=405992 GOY17_RS04335 WP_115843698.1 954261..954659(+) (pilG) [Lysobacter soli strain XL170]
ATGCTAGACGAGGTCCGCAACGGCAGCCTCGGCGGTCTGAAGGTCATGGTCATCGATGACTCGAAGACGATCCGCCGAAC
CGCCGAGACGTTGCTCAAGCGCGAGGGCTGCGAGGTGGTGACCGCCACCGACGGCTTCGAGGCGCTGGCGAAGATCGCCG
ATCAACAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGATGGTTACCAAACCTGCGCGTTGATCAAGAAC
AACCACCTGTTCAAAGGCACTCCGGTCATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGTCGCATCGT
CGGCTCCGAGCAGTACCTCACCAAACCATTCACACGCGAAGAACTGCTCGACGCGATCCGCACGCACGTAAACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697
  vicR Streptococcus mutans UA159

40.678

89.394

0.364

Multiple sequence alignment