Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | GO602_RS24395 | Genome accession | NZ_CP046602 |
| Coordinates | 5220194..5220751 (+) | Length | 185 a.a. |
| NCBI ID | WP_058141282.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain CMC-115 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5215194..5225751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO602_RS24375 (GO602_24350) | pilR | 5216471..5217808 (+) | 1338 | WP_024914651.1 | two-component system response regulator PilR | Regulator |
| GO602_RS24380 (GO602_24355) | thiO | 5217853..5218947 (-) | 1095 | WP_024914650.1 | glycine oxidase ThiO | - |
| GO602_RS24385 (GO602_24360) | - | 5219082..5219591 (+) | 510 | WP_024914649.1 | Tfp pilus assembly protein FimT/FimU | - |
| GO602_RS24390 (GO602_24365) | - | 5219697..5220203 (+) | 507 | WP_003102598.1 | Tfp pilus assembly protein FimT/FimU | - |
| GO602_RS24395 (GO602_24370) | pilV | 5220194..5220751 (+) | 558 | WP_058141282.1 | type 4a pilus minor pilin PilV | Machinery gene |
| GO602_RS24400 (GO602_24375) | pilW | 5220748..5221572 (+) | 825 | WP_058141283.1 | type 4a pilus minor pilin PilW | - |
| GO602_RS24405 (GO602_24380) | pilX | 5221569..5222156 (+) | 588 | WP_003112826.1 | type 4a pilus minor pilin PilX | - |
| GO602_RS24410 (GO602_24385) | pilY1 | 5222168..5225653 (+) | 3486 | WP_024914646.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20033.10 Da Isoelectric Point: 8.2255
>NTDB_id=405976 GO602_RS24395 WP_058141282.1 5220194..5220751(+) (pilV) [Pseudomonas aeruginosa strain CMC-115]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQAKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQAKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=405976 GO602_RS24395 WP_058141282.1 5220194..5220751(+) (pilV) [Pseudomonas aeruginosa strain CMC-115]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGATTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGCGAAGAACGAACTGCCAGGCGCTGGAGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCGATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGATTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGCGAAGAACGAACTGCCAGGCGCTGGAGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCGATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |