Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GO005_RS02540 Genome accession   NZ_CP046592
Coordinates   486615..487565 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain TR21     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 481615..492565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO005_RS02515 (GO005_02500) rapC 483075..484223 (+) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator
  GO005_RS02520 (GO005_02505) phrC 484207..484329 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  GO005_RS02525 (GO005_02510) yczM 484429..484518 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  GO005_RS02530 (GO005_02515) yczN 484600..484713 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  GO005_RS02535 (GO005_02520) thrD 484866..486230 (-) 1365 WP_015715246.1 aspartate kinase -
  GO005_RS02540 (GO005_02525) ceuB 486615..487565 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  GO005_RS02545 (GO005_02530) yclO 487558..488505 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  GO005_RS02550 (GO005_02535) yclP 488499..489257 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  GO005_RS02555 (GO005_02540) yclQ 489279..490232 (+) 954 WP_015715247.1 petrobactin ABC transporter substrate-binding protein YclQ -
  GO005_RS02560 (GO005_02545) cdaE 490279..491697 (-) 1419 WP_015715248.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=405847 GO005_RS02540 WP_014475804.1 486615..487565(+) (ceuB) [Bacillus subtilis strain TR21]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=405847 GO005_RS02540 WP_014475804.1 486615..487565(+) (ceuB) [Bacillus subtilis strain TR21]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGATACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTGATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment