Detailed information
Bioinformatically predicted
Overview
| Name | nin/comJ | Type | Regulator |
| Locus tag | GO004_RS12085 | Genome accession | NZ_CP046591 |
| Coordinates | 2313485..2313883 (+) | Length | 132 a.a. |
| NCBI ID | WP_032722902.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain R31 | ||
| Function | represses the expression of nucA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2308485..2318883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO004_RS12060 (GO004_12050) | hxlR | 2309219..2309581 (-) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
| GO004_RS12065 (GO004_12055) | hxlA | 2309814..2310446 (+) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| GO004_RS12070 (GO004_12060) | hxlB | 2310452..2311009 (+) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| GO004_RS12075 (GO004_12065) | tlpC | 2311120..2312841 (+) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| GO004_RS12080 (GO004_12070) | nucA/comI | 2313009..2313458 (+) | 450 | WP_157678489.1 | DNA-entry nuclease | Machinery gene |
| GO004_RS12085 (GO004_12075) | nin/comJ | 2313485..2313883 (+) | 399 | WP_032722902.1 | DNA-entry nuclease inhibitor | Regulator |
| GO004_RS12090 (GO004_12080) | bglC | 2313920..2315353 (-) | 1434 | WP_032722901.1 | 6-phospho-beta-glucosidase | - |
| GO004_RS12095 (GO004_12085) | yckD | 2315506..2315838 (-) | 333 | WP_015252849.1 | YckD family protein | - |
| GO004_RS12100 (GO004_12090) | - | 2315920..2316240 (-) | 321 | Protein_2400 | RDD family protein | - |
| GO004_RS12105 (GO004_12095) | - | 2316276..2316468 (-) | 193 | Protein_2401 | hypothetical protein | - |
| GO004_RS12110 (GO004_12100) | yckB | 2316630..2317493 (+) | 864 | WP_029727074.1 | transporter substrate-binding domain-containing protein | - |
| GO004_RS12115 (GO004_12105) | yckA | 2317503..2318183 (+) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 132 a.a. Molecular weight: 14961.94 Da Isoelectric Point: 5.1546
>NTDB_id=405804 GO004_RS12085 WP_032722902.1 2313485..2313883(+) (nin/comJ) [Bacillus subtilis strain R31]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAANGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAANGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV
Nucleotide
Download Length: 399 bp
>NTDB_id=405804 GO004_RS12085 WP_032722902.1 2313485..2313883(+) (nin/comJ) [Bacillus subtilis strain R31]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAAACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAAACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nin/comJ | Bacillus subtilis subsp. subtilis str. 168 |
98.485 |
100 |
0.985 |