Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GO004_RS11885 Genome accession   NZ_CP046591
Coordinates   2252297..2253247 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain R31     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2247297..2258247
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS11865 (GO004_11855) cdaE 2248165..2249583 (+) 1419 WP_014478836.1 MDR family MFS transporter -
  GO004_RS11870 (GO004_11860) yclQ 2249630..2250583 (-) 954 WP_015715247.1 petrobactin ABC transporter substrate-binding protein YclQ -
  GO004_RS11875 (GO004_11865) yclP 2250605..2251363 (-) 759 WP_195727644.1 petrobactin ABC transporter ATP-binding protein YclP -
  GO004_RS11880 (GO004_11870) yclO 2251357..2252304 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  GO004_RS11885 (GO004_11875) ceuB 2252297..2253247 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  GO004_RS11890 (GO004_11880) thrD 2253632..2254996 (+) 1365 WP_029726569.1 aspartate kinase -
  GO004_RS11895 (GO004_11885) yczN 2255149..2255262 (+) 114 WP_032678937.1 YjcZ family sporulation protein -
  GO004_RS11900 (GO004_11890) yczM 2255344..2255433 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  GO004_RS11905 (GO004_11895) phrC 2255533..2255655 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  GO004_RS11910 (GO004_11900) rapC 2255639..2256787 (-) 1149 WP_014475800.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=405800 GO004_RS11885 WP_014475804.1 2252297..2253247(-) (ceuB) [Bacillus subtilis strain R31]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=405800 GO004_RS11885 WP_014475804.1 2252297..2253247(-) (ceuB) [Bacillus subtilis strain R31]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment