Detailed information NTG0405790

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: GO004_RS08035
• Genome accession: NZ_CP046591
• Coordinates: 1504061..1505014 (-)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain R31
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1499061..1510014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO004_RS08005 (GO004_07990)	appD	1499180..1500166 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
GO004_RS08010 (GO004_07995)	yjaZ	1500358..1501143 (-)	786	WP_003232967.1	DUF2268 domain-containing protein	-
GO004_RS08015 (GO004_08000)	fabF	1501219..1502460 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
GO004_RS08020 (GO004_08005)	fabH	1502483..1503421 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
GO004_RS08025 (GO004_08010)	yjzB	1503586..1503825 (+)	240	WP_003232972.1	spore coat protein YjzB	-
GO004_RS08030 (GO004_08015)	comZ	1503855..1504046 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
GO004_RS08035 (GO004_08020)	med	1504061..1505014 (-)	954	WP_003245494.1	transcriptional regulator Med	Regulator
GO004_RS08040 (GO004_08025)	-	1505105..1505662 (-)	558	WP_003232974.1	hypothetical protein	-
GO004_RS08045 (GO004_08030)	-	1505744..1506478 (-)	735	WP_032721340.1	hypothetical protein	-
GO004_RS08050 (GO004_08035)	yjzD	1506727..1506912 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
GO004_RS08055 (GO004_08040)	yjzC	1506958..1507137 (-)	180	WP_003245356.1	YjzC family protein	-
GO004_RS08060 (GO004_08045)	argF	1507223..1508182 (-)	960	WP_032721338.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=405790 GO004_RS08035 WP_003245494.1 1504061..1505014(-) (med) [Bacillus subtilis strain R31]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=405790 GO004_RS08035 WP_003245494.1 1504061..1505014(-) (med) [Bacillus subtilis strain R31]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1