Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GO004_RS08030 Genome accession   NZ_CP046591
Coordinates   1503855..1504046 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain R31     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1498855..1509046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS08005 (GO004_07990) appD 1499180..1500166 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  GO004_RS08010 (GO004_07995) yjaZ 1500358..1501143 (-) 786 WP_003232967.1 DUF2268 domain-containing protein -
  GO004_RS08015 (GO004_08000) fabF 1501219..1502460 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  GO004_RS08020 (GO004_08005) fabH 1502483..1503421 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  GO004_RS08025 (GO004_08010) yjzB 1503586..1503825 (+) 240 WP_003232972.1 spore coat protein YjzB -
  GO004_RS08030 (GO004_08015) comZ 1503855..1504046 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  GO004_RS08035 (GO004_08020) med 1504061..1505014 (-) 954 WP_003245494.1 transcriptional regulator Med Regulator
  GO004_RS08040 (GO004_08025) - 1505105..1505662 (-) 558 WP_003232974.1 hypothetical protein -
  GO004_RS08045 (GO004_08030) - 1505744..1506478 (-) 735 WP_032721340.1 hypothetical protein -
  GO004_RS08050 (GO004_08035) yjzD 1506727..1506912 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  GO004_RS08055 (GO004_08040) yjzC 1506958..1507137 (-) 180 WP_003245356.1 YjzC family protein -
  GO004_RS08060 (GO004_08045) argF 1507223..1508182 (-) 960 WP_032721338.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=405789 GO004_RS08030 WP_003224559.1 1503855..1504046(-) (comZ) [Bacillus subtilis strain R31]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=405789 GO004_RS08030 WP_003224559.1 1503855..1504046(-) (comZ) [Bacillus subtilis strain R31]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment