Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | GO004_RS01160 | Genome accession | NZ_CP046591 |
| Coordinates | 192801..193838 (+) | Length | 345 a.a. |
| NCBI ID | WP_015714257.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain R31 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 187801..198838
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO004_RS01135 (GO004_01125) | rsbRD | 188020..188856 (+) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
| GO004_RS01140 (GO004_01130) | yqhB | 188909..190237 (-) | 1329 | WP_074794463.1 | hemolysin family protein | - |
| GO004_RS01145 (GO004_01135) | corA | 190380..191333 (+) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| GO004_RS01150 (GO004_01140) | - | 191335..191532 (+) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| GO004_RS01155 (GO004_01145) | comGA | 191744..192814 (+) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| GO004_RS01160 (GO004_01150) | comGB | 192801..193838 (+) | 1038 | WP_015714257.1 | comG operon protein ComGB | Machinery gene |
| GO004_RS01165 (GO004_01155) | comGC | 193852..194148 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| GO004_RS01170 (GO004_01160) | comGD | 194138..194569 (+) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| GO004_RS01175 (GO004_01165) | comGE | 194553..194900 (+) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| GO004_RS01180 (GO004_01170) | comGF | 194926..195309 (+) | 384 | WP_195727813.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GO004_RS01185 (GO004_01175) | comGG | 195310..195684 (+) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| GO004_RS01190 (GO004_01180) | spoIITA | 195756..195935 (+) | 180 | WP_029726723.1 | YqzE family protein | - |
| GO004_RS01195 (GO004_01185) | yqzG | 195977..196303 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| GO004_RS01200 (GO004_01190) | tapA | 196573..197334 (+) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GO004_RS01205 (GO004_01195) | sipW | 197318..197890 (+) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| GO004_RS01210 (GO004_01200) | tasA | 197954..198739 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39733.22 Da Isoelectric Point: 9.7900
>NTDB_id=405764 GO004_RS01160 WP_015714257.1 192801..193838(+) (comGB) [Bacillus subtilis strain R31]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=405764 GO004_RS01160 WP_015714257.1 192801..193838(+) (comGB) [Bacillus subtilis strain R31]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACTTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACTTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |