Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   GNK04_RS09150 Genome accession   NZ_CP046564
Coordinates   1737540..1738223 (+) Length   227 a.a.
NCBI ID   WP_159787342.1    Uniprot ID   -
Organism   Bacillus sp. N1-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1732540..1743223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GNK04_RS09135 (GNK04_09135) - 1734651..1735853 (-) 1203 WP_159782185.1 efflux RND transporter periplasmic adaptor subunit -
  GNK04_RS09140 (GNK04_09140) spxA 1736141..1736536 (+) 396 WP_098443134.1 transcriptional regulator SpxA -
  GNK04_RS09145 (GNK04_09145) - 1736585..1737271 (-) 687 WP_159782186.1 TerC family protein -
  GNK04_RS09150 (GNK04_09150) mecA 1737540..1738223 (+) 684 WP_159787342.1 adaptor protein MecA Regulator
  GNK04_RS09155 (GNK04_09155) - 1738355..1739533 (+) 1179 WP_159782187.1 competence protein CoiA family protein -
  GNK04_RS09160 (GNK04_09160) pepF 1739628..1741445 (+) 1818 WP_159782188.1 oligoendopeptidase F -
  GNK04_RS09165 (GNK04_09165) - 1741481..1741657 (-) 177 WP_240904099.1 hypothetical protein -
  GNK04_RS09170 (GNK04_09170) - 1741760..1742587 (-) 828 WP_240904143.1 ClpXP adapter SpxH family protein -
  GNK04_RS09175 (GNK04_09175) - 1742680..1743075 (-) 396 WP_159782190.1 globin -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27049.99 Da        Isoelectric Point: 3.9650

>NTDB_id=405544 GNK04_RS09150 WP_159787342.1 1737540..1738223(+) (mecA) [Bacillus sp. N1-1]
MEIERVNANTLKFFITYRDIENRGFDREEIWYDRERGEELFWEMMDEAHQREQFSLEGPLWIQVQALEKGLEIIVTRAQM
SNDGSKLELPISEEKQLDLPLDENMDKILDDKFALQNNYEPEDEPEPLEGEELSFMIAFRDFEDVISLSHGFDPVGVENG
LYHYEDRYYLHVVFDDTLIEEDQDNRLSQLLEYGYETELTIHRIQEYGKEILSEEALEQLRGHFPLL

Nucleotide


Download         Length: 684 bp        

>NTDB_id=405544 GNK04_RS09150 WP_159787342.1 1737540..1738223(+) (mecA) [Bacillus sp. N1-1]
ATGGAAATCGAACGCGTCAACGCGAATACATTGAAATTCTTTATTACGTATAGAGACATTGAAAATAGAGGATTCGATCG
AGAAGAAATTTGGTACGACAGAGAAAGAGGAGAAGAATTGTTCTGGGAGATGATGGATGAAGCTCATCAAAGAGAACAGT
TTTCACTCGAGGGCCCTCTCTGGATTCAAGTTCAAGCTCTTGAAAAAGGACTTGAGATCATTGTCACTCGTGCTCAAATG
TCAAACGACGGATCAAAACTTGAACTACCGATTTCAGAGGAAAAGCAGCTTGATCTTCCACTTGATGAGAACATGGATAA
AATTCTTGATGATAAATTTGCCCTTCAGAATAACTATGAGCCAGAAGACGAGCCTGAACCTCTTGAAGGAGAAGAGCTTT
CCTTTATGATCGCGTTTAGAGATTTTGAAGATGTCATTTCATTATCGCACGGATTTGATCCTGTTGGAGTTGAAAATGGT
CTATACCATTATGAGGATCGTTACTATCTCCACGTTGTCTTTGATGATACATTGATAGAAGAAGATCAAGACAACCGTTT
AAGTCAGCTGTTGGAATATGGATATGAGACAGAATTGACGATTCACCGCATACAGGAATACGGTAAGGAGATTCTCTCTG
AGGAAGCTCTAGAACAACTCCGCGGACACTTCCCACTCTTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.556

99.119

0.551


Multiple sequence alignment