Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | GNK04_RS00580 | Genome accession | NZ_CP046564 |
| Coordinates | 110669..113110 (+) | Length | 813 a.a. |
| NCBI ID | WP_159780804.1 | Uniprot ID | A0A7Z2K1I2 |
| Organism | Bacillus sp. N1-1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 105669..118110
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GNK04_RS00565 (GNK04_00565) | - | 108540..109001 (+) | 462 | WP_159780801.1 | CtsR family transcriptional regulator | - |
| GNK04_RS00570 (GNK04_00570) | - | 109039..109575 (+) | 537 | WP_159780802.1 | UvrB/UvrC motif-containing protein | - |
| GNK04_RS00575 (GNK04_00575) | - | 109575..110672 (+) | 1098 | WP_159780803.1 | protein arginine kinase | - |
| GNK04_RS00580 (GNK04_00580) | clpC | 110669..113110 (+) | 2442 | WP_159780804.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| GNK04_RS00585 (GNK04_00585) | radA | 113362..114735 (+) | 1374 | WP_159780805.1 | DNA repair protein RadA | Machinery gene |
| GNK04_RS00590 (GNK04_00590) | disA | 114739..115800 (+) | 1062 | WP_159780806.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| GNK04_RS00595 (GNK04_00595) | - | 115961..117058 (+) | 1098 | WP_159780807.1 | PIN/TRAM domain-containing protein | - |
| GNK04_RS00600 (GNK04_00600) | ispD | 117084..117776 (+) | 693 | WP_159780808.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90740.24 Da Isoelectric Point: 6.0567
>NTDB_id=405528 GNK04_RS00580 WP_159780804.1 110669..113110(+) (clpC) [Bacillus sp. N1-1]
MMFGRFTERAQKVLALAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALTALGLGSEKIQKEVEKLIGRGQDSVQSIHY
TPRAKKVIELSMDEARKLSHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSSSSHQSGGASAN
TPTLDSLARDLTVIARDNGLDPVIGRSKEIERVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVNEPTSDESALILKGLRDRYEAHHRVTITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAA
SKVRLRSYTAPPNLKELDKKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEQTKKEWKEKQGKENQEVTPEDIAIV
VANWTGIPVSKLEEQETERLLKMEEILHNRLIGQEEAVKSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVA
ETLFGEEDSVIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRVVDFRNTVVIMTSNVGASTLKRNKYVGFSTGSEGQEYSDMKGKVMDDLKKTFRPEFLNRIDETIVFHSLEKKHL
KEIIVLMANQLKARLSDHGIDFELTDLALDKISEEGYDPEYGARPLRRALQRHIEDRLSEELLKGNIEKGQRVKIDYKEN
DFVVETLSEATSS
MMFGRFTERAQKVLALAQEEAIRLGHNNVGTEHILLGLIREGEGIAAKALTALGLGSEKIQKEVEKLIGRGQDSVQSIHY
TPRAKKVIELSMDEARKLSHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESSSSSHQSGGASAN
TPTLDSLARDLTVIARDNGLDPVIGRSKEIERVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVNEPTSDESALILKGLRDRYEAHHRVTITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAA
SKVRLRSYTAPPNLKELDKKLEEVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEQTKKEWKEKQGKENQEVTPEDIAIV
VANWTGIPVSKLEEQETERLLKMEEILHNRLIGQEEAVKSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARAVA
ETLFGEEDSVIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRVVDFRNTVVIMTSNVGASTLKRNKYVGFSTGSEGQEYSDMKGKVMDDLKKTFRPEFLNRIDETIVFHSLEKKHL
KEIIVLMANQLKARLSDHGIDFELTDLALDKISEEGYDPEYGARPLRRALQRHIEDRLSEELLKGNIEKGQRVKIDYKEN
DFVVETLSEATSS
Nucleotide
Download Length: 2442 bp
>NTDB_id=405528 GNK04_RS00580 WP_159780804.1 110669..113110(+) (clpC) [Bacillus sp. N1-1]
ATGATGTTTGGACGATTTACAGAACGTGCCCAGAAAGTACTTGCACTAGCACAAGAAGAAGCAATCCGACTTGGTCATAA
TAACGTTGGAACTGAGCATATTCTACTTGGCTTGATTCGCGAAGGAGAAGGTATTGCCGCTAAAGCATTAACAGCTCTTG
GGCTGGGCTCAGAAAAAATTCAAAAAGAAGTAGAGAAGTTGATTGGACGTGGACAGGATTCTGTTCAATCCATTCACTAT
ACACCAAGAGCTAAGAAAGTTATCGAGCTATCAATGGATGAAGCACGTAAGCTAAGCCATTCTTATGTTGGAACTGAGCA
TATCTTACTTGGTCTTATTCGTGAAGGAGAAGGTGTTGCAGCTCGTGTTCTTAACAACCTTGGTGTCAGCTTGAATAAAG
CACGTCAACAGGTTCTTCAATTGCTTGGAAGCAATGAAAGTTCTTCTTCTAGTCATCAGAGTGGTGGGGCAAGTGCCAAT
ACGCCAACGCTTGATAGCCTAGCAAGAGACCTTACTGTCATAGCACGAGACAATGGTTTAGACCCTGTTATTGGCCGTAG
CAAAGAAATTGAGCGAGTGATTGAAGTGCTTAGCCGACGTACGAAAAACAATCCTGTTCTTATTGGTGAGCCCGGTGTAG
GTAAGACGGCGATTGCTGAGGGCCTTGCGCAACAAATTATTAATAATGAAGTACCTGAGACTCTCCGTGATAAGCGTGTC
ATGACGCTTGATATGGGTACTGTAGTAGCGGGAACGAAATACCGCGGTGAATTTGAAGATCGTTTAAAGAAAGTAATGGA
CGAAATTCGTCAGGCAGGCAATATCATTTTATTCATTGATGAACTTCATACGTTAATTGGAGCTGGTGGGGCAGAAGGTG
CAATCGATGCATCGAACATCCTCAAGCCGGCACTAGCAAGAGGAGAGCTTCAATGTATTGGTGCAACAACACTTGACGAG
TATCGTAAATATATTGAGAAGGATGCGGCACTTGAAAGACGTTTCCAACCAATACAGGTAAATGAACCGACAAGTGATGA
ATCTGCGCTAATCTTAAAAGGTCTACGTGATCGTTATGAAGCGCATCACCGCGTTACAATTACAGATGATGCTATTGAAG
CAGCTGTAAAGCTTTCAGATCGTTATATCTCAGATCGTTTTCTACCAGATAAAGCGATTGATTTAATTGACGAAGCTGCT
TCGAAAGTGCGTCTACGTTCTTATACAGCACCACCGAATTTGAAAGAGCTTGATAAGAAGCTGGAAGAAGTTCGAAAAGA
AAAAGATGCTGCTGTTCAAAGCCAAGAATTTGAGAAAGCCGCTTCTCTTCGCGACTCTGAGCAACGCTTACGTGAGCAGC
TTGAGCAAACGAAGAAAGAGTGGAAAGAAAAGCAAGGCAAAGAGAATCAAGAAGTTACACCAGAAGATATTGCGATCGTC
GTTGCCAATTGGACTGGAATCCCGGTTTCCAAGCTAGAAGAGCAGGAAACAGAGCGACTATTGAAGATGGAAGAAATTCT
TCATAATCGCCTGATCGGTCAAGAAGAAGCAGTTAAATCAATTTCAAAAGCAGTTCGACGTGCTCGTGCTGGTCTTAAGG
ATCCTAAACGCCCAATTGGTTCATTCATCTTCCTTGGACCAACTGGTGTTGGTAAGACGGAACTCGCTCGTGCAGTTGCT
GAAACGCTTTTCGGTGAAGAAGATTCCGTAATCCGCATTGATATGTCCGAGTACATGGAGAAACACTCAACGTCACGCCT
TGTTGGATCACCTCCAGGATATGTTGGTTATGAAGAAGGTGGTCAGTTAACTGAGAAGGTAAGACGCAAACCTTATTCTG
TTATCTTGCTAGATGAGATTGAAAAAGCACACCCAGACGTGTTTAATATCCTATTACAAGTGCTAGAAGATGGACGATTG
ACTGATTCTAAAGGGCGCGTAGTTGATTTCCGTAATACAGTAGTCATTATGACGTCAAACGTTGGGGCTAGCACGCTTAA
GCGCAATAAATATGTTGGGTTCTCAACAGGATCTGAAGGTCAAGAATATAGTGATATGAAAGGTAAAGTGATGGATGATC
TCAAGAAGACTTTCCGTCCGGAGTTCTTGAACCGTATTGATGAGACGATCGTATTCCATTCTCTTGAAAAGAAACACTTG
AAAGAAATTATAGTACTGATGGCCAACCAGCTTAAGGCTCGTCTATCTGATCATGGGATTGATTTTGAACTAACCGATCT
TGCTCTTGATAAAATTTCTGAAGAAGGATATGATCCAGAATATGGTGCTCGACCGCTTAGAAGAGCTTTACAGCGTCATA
TTGAAGATCGTCTTTCAGAAGAATTGCTAAAAGGAAATATTGAAAAAGGTCAGCGAGTGAAGATTGATTACAAAGAGAAC
GATTTTGTTGTTGAAACTCTTTCTGAAGCAACTTCATCATAA
ATGATGTTTGGACGATTTACAGAACGTGCCCAGAAAGTACTTGCACTAGCACAAGAAGAAGCAATCCGACTTGGTCATAA
TAACGTTGGAACTGAGCATATTCTACTTGGCTTGATTCGCGAAGGAGAAGGTATTGCCGCTAAAGCATTAACAGCTCTTG
GGCTGGGCTCAGAAAAAATTCAAAAAGAAGTAGAGAAGTTGATTGGACGTGGACAGGATTCTGTTCAATCCATTCACTAT
ACACCAAGAGCTAAGAAAGTTATCGAGCTATCAATGGATGAAGCACGTAAGCTAAGCCATTCTTATGTTGGAACTGAGCA
TATCTTACTTGGTCTTATTCGTGAAGGAGAAGGTGTTGCAGCTCGTGTTCTTAACAACCTTGGTGTCAGCTTGAATAAAG
CACGTCAACAGGTTCTTCAATTGCTTGGAAGCAATGAAAGTTCTTCTTCTAGTCATCAGAGTGGTGGGGCAAGTGCCAAT
ACGCCAACGCTTGATAGCCTAGCAAGAGACCTTACTGTCATAGCACGAGACAATGGTTTAGACCCTGTTATTGGCCGTAG
CAAAGAAATTGAGCGAGTGATTGAAGTGCTTAGCCGACGTACGAAAAACAATCCTGTTCTTATTGGTGAGCCCGGTGTAG
GTAAGACGGCGATTGCTGAGGGCCTTGCGCAACAAATTATTAATAATGAAGTACCTGAGACTCTCCGTGATAAGCGTGTC
ATGACGCTTGATATGGGTACTGTAGTAGCGGGAACGAAATACCGCGGTGAATTTGAAGATCGTTTAAAGAAAGTAATGGA
CGAAATTCGTCAGGCAGGCAATATCATTTTATTCATTGATGAACTTCATACGTTAATTGGAGCTGGTGGGGCAGAAGGTG
CAATCGATGCATCGAACATCCTCAAGCCGGCACTAGCAAGAGGAGAGCTTCAATGTATTGGTGCAACAACACTTGACGAG
TATCGTAAATATATTGAGAAGGATGCGGCACTTGAAAGACGTTTCCAACCAATACAGGTAAATGAACCGACAAGTGATGA
ATCTGCGCTAATCTTAAAAGGTCTACGTGATCGTTATGAAGCGCATCACCGCGTTACAATTACAGATGATGCTATTGAAG
CAGCTGTAAAGCTTTCAGATCGTTATATCTCAGATCGTTTTCTACCAGATAAAGCGATTGATTTAATTGACGAAGCTGCT
TCGAAAGTGCGTCTACGTTCTTATACAGCACCACCGAATTTGAAAGAGCTTGATAAGAAGCTGGAAGAAGTTCGAAAAGA
AAAAGATGCTGCTGTTCAAAGCCAAGAATTTGAGAAAGCCGCTTCTCTTCGCGACTCTGAGCAACGCTTACGTGAGCAGC
TTGAGCAAACGAAGAAAGAGTGGAAAGAAAAGCAAGGCAAAGAGAATCAAGAAGTTACACCAGAAGATATTGCGATCGTC
GTTGCCAATTGGACTGGAATCCCGGTTTCCAAGCTAGAAGAGCAGGAAACAGAGCGACTATTGAAGATGGAAGAAATTCT
TCATAATCGCCTGATCGGTCAAGAAGAAGCAGTTAAATCAATTTCAAAAGCAGTTCGACGTGCTCGTGCTGGTCTTAAGG
ATCCTAAACGCCCAATTGGTTCATTCATCTTCCTTGGACCAACTGGTGTTGGTAAGACGGAACTCGCTCGTGCAGTTGCT
GAAACGCTTTTCGGTGAAGAAGATTCCGTAATCCGCATTGATATGTCCGAGTACATGGAGAAACACTCAACGTCACGCCT
TGTTGGATCACCTCCAGGATATGTTGGTTATGAAGAAGGTGGTCAGTTAACTGAGAAGGTAAGACGCAAACCTTATTCTG
TTATCTTGCTAGATGAGATTGAAAAAGCACACCCAGACGTGTTTAATATCCTATTACAAGTGCTAGAAGATGGACGATTG
ACTGATTCTAAAGGGCGCGTAGTTGATTTCCGTAATACAGTAGTCATTATGACGTCAAACGTTGGGGCTAGCACGCTTAA
GCGCAATAAATATGTTGGGTTCTCAACAGGATCTGAAGGTCAAGAATATAGTGATATGAAAGGTAAAGTGATGGATGATC
TCAAGAAGACTTTCCGTCCGGAGTTCTTGAACCGTATTGATGAGACGATCGTATTCCATTCTCTTGAAAAGAAACACTTG
AAAGAAATTATAGTACTGATGGCCAACCAGCTTAAGGCTCGTCTATCTGATCATGGGATTGATTTTGAACTAACCGATCT
TGCTCTTGATAAAATTTCTGAAGAAGGATATGATCCAGAATATGGTGCTCGACCGCTTAGAAGAGCTTTACAGCGTCATA
TTGAAGATCGTCTTTCAGAAGAATTGCTAAAAGGAAATATTGAAAAAGGTCAGCGAGTGAAGATTGATTACAAAGAGAAC
GATTTTGTTGTTGAAACTCTTTCTGAAGCAACTTCATCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
83.107 |
99.754 |
0.829 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.88 |
98.647 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.521 |
100 |
0.462 |
| clpC | Streptococcus thermophilus LMD-9 |
45.576 |
100 |
0.462 |
| clpC | Streptococcus mutans UA159 |
44.593 |
100 |
0.451 |
| clpC | Streptococcus pneumoniae D39 |
45.217 |
99.016 |
0.448 |
| clpC | Streptococcus pneumoniae Rx1 |
45.217 |
99.016 |
0.448 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.093 |
99.016 |
0.446 |
| clpE | Streptococcus mutans UA159 |
53.272 |
80.812 |
0.431 |
| clpE | Streptococcus pneumoniae R6 |
52.527 |
80.32 |
0.422 |
| clpE | Streptococcus pneumoniae Rx1 |
52.527 |
80.32 |
0.422 |
| clpE | Streptococcus pneumoniae D39 |
52.527 |
80.32 |
0.422 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.147 |
80.197 |
0.418 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.273 |
84.625 |
0.417 |