Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | GOQ07_RS08995 | Genome accession | NZ_CP046554 |
| Coordinates | 1858143..1858523 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 19WIARLN011_full | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1853143..1863523
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOQ07_RS08965 (GOQ07_08875) | kdsB | 1854046..1854807 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| GOQ07_RS08970 (GOQ07_08880) | - | 1854819..1855799 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| GOQ07_RS08975 (GOQ07_08885) | - | 1855811..1856152 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| GOQ07_RS08980 (GOQ07_08890) | - | 1856170..1856943 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| GOQ07_RS08985 (GOQ07_08895) | - | 1856981..1857589 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| GOQ07_RS08990 (GOQ07_08900) | - | 1857599..1858153 (+) | 555 | WP_000841374.1 | type II secretion system protein | - |
| GOQ07_RS08995 (GOQ07_08905) | xcpV | 1858143..1858523 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| GOQ07_RS09000 (GOQ07_08910) | xcpW | 1858523..1859224 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| GOQ07_RS09005 (GOQ07_08915) | gspK | 1859224..1860183 (+) | 960 | WP_000301468.1 | type II secretion system minor pseudopilin GspK | - |
| GOQ07_RS09010 (GOQ07_08920) | - | 1860413..1861009 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| GOQ07_RS09015 (GOQ07_08925) | ung | 1861060..1861773 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| GOQ07_RS09020 (GOQ07_08930) | - | 1861770..1862894 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| GOQ07_RS09025 (GOQ07_08935) | tadA | 1862901..1863404 (+) | 504 | WP_031954106.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=405458 GOQ07_RS08995 WP_000836911.1 1858143..1858523(+) (xcpV) [Acinetobacter baumannii strain 19WIARLN011_full]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=405458 GOQ07_RS08995 WP_000836911.1 1858143..1858523(+) (xcpV) [Acinetobacter baumannii strain 19WIARLN011_full]
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGTTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTTGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |